Protein Info for Echvi_2939 in Echinicola vietnamensis KMM 6221, DSM 17526
Annotation: 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 55% identical to UGL_BURCM: Ureidoglycolate lyase (Bamb_4846) from Burkholderia ambifaria (strain ATCC BAA-244 / AMMD)
KEGG orthology group: None (inferred from 68% identity to zpr:ZPR_4369)MetaCyc: 50% identical to 2,4-didehydro-3-deoxy-L-fuconate hydrolase (Sphingomonas sp. SKA58)
RXN-12096 [EC: 3.7.1.26]
Predicted SEED Role
"Fumarylacetoacetate hydrolase family protein" in subsystem Gentisare degradation or Salicylate and gentisate catabolism
MetaCyc Pathways
- L-fucose degradation III (4/8 steps found)
- L-rhamnose degradation III (2/7 steps found)
Isozymes
No predicted isozymesUse Curated BLAST to search for 3.7.1.26
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
See L0G0V3 at UniProt or InterPro
Protein Sequence (285 amino acids)
>Echvi_2939 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) (Echinicola vietnamensis KMM 6221, DSM 17526) MKLLRFGNPGEEKPGIEKANGIRIDCSAFGEDWTEDFLTQDGLNRLTTWLESNEAKCPEI SSEVRLGPPIKRPSKIICIGLNYKLHAKETGAEVPKQPIIFMKSTTSLSGPNDDIIIPRN SEKTDWEVELAVMIGKKASYVDKENAMDYVAGYCLLNDVSERDFQLSHGGQWVKGKSNDT FSPLGPYLVTKDEIKDPQHLRLWLKHNGKMLQDSNTSDMVFDIPTLVSHLSNYMTLLPGD IISTGTPSGVGMGLTPPTYLKEGDVVELGIDGLGTSRQKAVNYKG