Protein Info for Echvi_2931 in Echinicola vietnamensis KMM 6221, DSM 17526

Annotation: Pirin-related protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 289 PF02678: Pirin" amino acids 27 to 124 (98 residues), 108.1 bits, see alignment E=2.4e-35 PF05726: Pirin_C" amino acids 178 to 274 (97 residues), 48.8 bits, see alignment E=8.2e-17

Best Hits

KEGG orthology group: K06911, (no description) (inferred from 53% identity to lby:Lbys_1256)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See L0FZ24 at UniProt or InterPro

Protein Sequence (289 amino acids)

>Echvi_2931 Pirin-related protein (Echinicola vietnamensis KMM 6221, DSM 17526)
MSNTDLIIPERSRDIGDFLVGRLLPFRKKRMVGPFVFIDHMGPSTVKPGHYMDIGQHPHV
GLSTLTFLLEGEMVHEDSLGTKQLIAPGSVNWMTAGRGVTHTERTPPAMRDGGTYPIHGY
QIWVALPKEKELMAPQFHHIDAKDLPQWQDQGASFTLVAGKGYGRTSPVPVHSDLFMIDI
KTTADHDLEIVGHLEGEIGICIVTGEVNACDQVVEKDHLLVSKIDNQCALKIKKDSHIIL
FGGPAFPEERFIEWNFVASDKAIIEEGKAKWKAKDWPMVKGDDSYIPWP