Protein Info for Echvi_2829 in Echinicola vietnamensis KMM 6221, DSM 17526

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 signal peptide" amino acids 1 to 23 (23 residues), see Phobius details

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See L0G1A4 at UniProt or InterPro

Protein Sequence (1100 amino acids)

>Echvi_2829 hypothetical protein (Echinicola vietnamensis KMM 6221, DSM 17526)
MKVKLVFIYFTLLWLGSYTVSNAQFDQERFGKNRIQHHEFDWYFFSSNNFEVYYYGGGRD
NARMAIDYLENEFERITQMIGYVAYTKPKIFIYNSREEWLESNLDLEEESYSVNGETFFS
KLMAEVPYTGDWASFKEELLYRTSKVIIEEMLYGSTIADAFQSNLINSFPEWFIDGTALY
LAKGWSLEMDDYVRHYLKGNENPKLHKLNEREAALVGQSIWNFIVQKYGKRYVSSILNLS
RINRNEENSISNTLGVGYKSFAEQWRAYYTMVNEPVFSTFKEPSTENVIAATKKNEDGSI
NDIKFSPDAEHLAYVINNNGKFKVIVRNLSSNNEVTVFKGGTSTDDQEPNFTSPVIAWRD
TLNLTIATFKRGLTTLRMRSIDGSSQDKIFLRNITQINSLDFSPNGKNMVLSAMAGGRTN
IYTLNLRGRGRRLTNDVFDDITPVFVNDSTIVYASNHTALPDSVLTRAPDVRELPDYFNL
YKLELGDSLVTTKLTNMNSKNFMPRPMNQNFVLHLSDQSGIYNLMRYGLGSEVSSQVSAF
NTSVEAFDFSPIINKWAYAYKDGTGSKLVLESYPNIDQFTPGTPRIQLNQAKKLNERLAE
RRLEKQQEEETEEKEVEVPRRLAPEVEEPLTIDSIPPSSNNTGAINVDRLRFEHHSGINT
ENYSFDTVPTPIEQREGRLASGKSDILEAFRKQSLKNTVRGPRDYMPQVQANSLRTTFVV
DPLRGFGLNIEGKMTELLNNHVFQGGIMTPLDFRSGSDVYFEYQYLKSRIDYRARFDRRA
LVISEGDVTYQRYVLTKGELGFSYPFTEHTRFTVAPFYAKTQYFNLNPDSLVLGSEGPQN
RFDVNYLGGKAELVVDKTRLLGLHMEQGFKGKVGIKHYQGIDEGDRSFSNVYLDLRNYQK
IHKNITFATKLFAGSFMGNNPQSYLVGGMKNWLFNEFYEPPSNRPEPSPVRNRDGVENSN
ILFAEFVDLRGYDYDEIRGRNVVTFSAELRIPLFSYLSRGNIASNFVKNFQLVGFYDAGS
SWDDAAPWERVNDQNTEVINTDGSPFNITLNNFNNPWLQSYGAGLRTVLLNYYVKFDTAW
PIRNYEVGDPRFYVTLGYNF