Protein Info for Echvi_2825 in Echinicola vietnamensis KMM 6221, DSM 17526

Annotation: Peptidase family C25.

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1094 signal peptide" amino acids 1 to 28 (28 residues), see Phobius details PF01364: Peptidase_C25" amino acids 366 to 737 (372 residues), 325.8 bits, see alignment E=4.1e-101 TIGR04183: Por secretion system C-terminal sorting domain" amino acids 1001 to 1075 (75 residues), 23.6 bits, see alignment 2e-09 PF18962: Por_Secre_tail" amino acids 1001 to 1042 (42 residues), 20.5 bits, see alignment (E = 4.3e-08)

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See L0FYT9 at UniProt or InterPro

Protein Sequence (1094 amino acids)

>Echvi_2825 Peptidase family C25. (Echinicola vietnamensis KMM 6221, DSM 17526)
MKPFAKILRSISLICLTWFVTVPFVFGQTSYFKFPITKAGIYQLSLAELPQLKDARLENI
AIYGASGMLPQKLEEESLHLQELPSLLLDGKLLVYLEGPHQIKTEGDSLHYRHHSYTDTA
YYLVKTHVTAPKRLSSELPAPADAPTFTTEQAMLYALYAYKKETINLLSSGRKWYGNRVR
AGGIASFNMQVDPYDQGPIYYHANLLAQSTSEATLRIRSRQQEFFSTVISAIPSSTYGLK
GREKHISGFTGHVDVGNPTQFNLELKSSDPNAVGFLDYFLLGLPHLAANVEEGIYMNLNH
EQPISLDAKKHLLYWDVTQSDRPEKLSTSAGTVHLRPYQRLAIADPMKAPKIHGLQSISQ
NIRQINPAELVVITSPSLRFQANKLADFKRSIGISTAVVTPQEIYDAYNYGTRDVTAIRN
FLADQYHRHQTLQHVLLFGKGTFDYKHISPGHPNLVPTYSSRNSLHPLTSFGSDDYFGFL
EFGQGQWAESEAGDLPLAIGVGRLPVTNTQEARNVVEKIIQYETHSLQLGKWKRKLLFVA
DDGDYNVHLDHSETHTASLYQSSPFYDVQKLYLDAFKQVAEGSFQTAPEAKAALAESMED
GALLINYIGHGNDNTLAAERIFQVQDLQNWPETQHFPLIVTATCEFGRHDSPYLRSGAEE
LLIAKNKGAIALLTTGRPVFSSINFSLNKAFISAFQENDEGQGLQLGDIFKATKNNSLNG
PYNRNFSLLGDPSLRLARPELSIDLTVSSAKGTAIDTLYSHQPTRITGTVRDPLTGLPMH
NFDGTFLLEILGEPITVKTNGDEGPASTFQELNNIRYRGSGNITNGQFTAEIFVGQDTLG
RPSDGIIRIFASSESSTFEAINAQAISLEEGTFSAPDDREGPSIRLFANDTIQSPTTVSS
TQITFIASLKDESGIQTTSENGQGIMLKVNGNSPIVLDNYYRTIHGNYQQGIIEMPIGGL
EEGINTLELTAYDHAGNASTQTLKIKVSGSENIKIEEIINYPNPTNDISYFKIKHNRPNE
NIILYLTIYNLLGKKIYSTEKRYPKASTEIPDLEWIFLRDMTKIPAKGTYIYELQLTSER
DGTSDQAIGKINIQ