Protein Info for Echvi_2805 in Echinicola vietnamensis KMM 6221, DSM 17526

Annotation: MFS transporter, sugar porter (SP) family

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 448 signal peptide" amino acids 1 to 30 (30 residues), see Phobius details transmembrane" amino acids 46 to 65 (20 residues), see Phobius details amino acids 77 to 94 (18 residues), see Phobius details amino acids 101 to 122 (22 residues), see Phobius details amino acids 133 to 152 (20 residues), see Phobius details amino acids 165 to 184 (20 residues), see Phobius details amino acids 248 to 269 (22 residues), see Phobius details amino acids 283 to 305 (23 residues), see Phobius details amino acids 313 to 332 (20 residues), see Phobius details amino acids 344 to 365 (22 residues), see Phobius details amino acids 377 to 400 (24 residues), see Phobius details amino acids 406 to 424 (19 residues), see Phobius details TIGR00879: MFS transporter, sugar porter (SP) family" amino acids 4 to 438 (435 residues), 361.6 bits, see alignment E=3.2e-112 PF00083: Sugar_tr" amino acids 11 to 441 (431 residues), 377.6 bits, see alignment E=9.3e-117 PF07690: MFS_1" amino acids 15 to 298 (284 residues), 90.7 bits, see alignment E=9.4e-30 amino acids 291 to 439 (149 residues), 38.6 bits, see alignment E=6.6e-14

Best Hits

KEGG orthology group: None (inferred from 67% identity to mtt:Ftrac_1568)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See L0FYS3 at UniProt or InterPro

Protein Sequence (448 amino acids)

>Echvi_2805 MFS transporter, sugar porter (SP) family (Echinicola vietnamensis KMM 6221, DSM 17526)
MNSKKYVIFLSIVAALGGFLFGFDTAVISGAERFIQEKWQLSDWTHGMAVAIALYGTVIG
ALFGGIPADKYGRKTSLLWIGVLYFISALGSALAPDVYSFMFFRFIGGLGVGASSVVAPM
YISEIAPAKNRGVLVALYQFNIVFGILMAYFSNYLIEMADLNESWRWMMGMEAIPALIYT
LLSIRVPKSPRWLIAHHNKVEEATQILRKTDPEGVDEAIHLAIEERNREKIKVGFAVLFK
HSHLKTTLLAIMIALFNQLSGINAIIYFAPRVFEMAGIDQKSALLSTIGIGVVNMIATMI
GLYLIDRIGRKKLMVIGSIGYIISLLLMAYSFSGGVINSGYLPLFVFVFIASHAVGQGSV
IWVFISEVFPNETRAFGQSIGCFTHWILAAVIANVFPFFANSFGPASIFGFFAVMMGLQL
LWVLTKMPETKGRSLEEIQQDLKIKQGT