Protein Info for Echvi_2676 in Echinicola vietnamensis KMM 6221, DSM 17526

Annotation: 7TM diverse intracellular signalling./7TMR-DISM extracellular 2.

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 625 signal peptide" amino acids 1 to 16 (16 residues), see Phobius details transmembrane" amino acids 183 to 204 (22 residues), see Phobius details amino acids 211 to 227 (17 residues), see Phobius details amino acids 247 to 270 (24 residues), see Phobius details amino acids 282 to 299 (18 residues), see Phobius details amino acids 305 to 327 (23 residues), see Phobius details amino acids 335 to 353 (19 residues), see Phobius details amino acids 365 to 386 (22 residues), see Phobius details PF07696: 7TMR-DISMED2" amino acids 36 to 170 (135 residues), 94.8 bits, see alignment E=4.7e-31 PF07695: 7TMR-DISM_7TM" amino acids 182 to 384 (203 residues), 68.4 bits, see alignment E=8.5e-23

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See L0G1P1 at UniProt or InterPro

Protein Sequence (625 amino acids)

>Echvi_2676 7TM diverse intracellular signalling./7TMR-DISM extracellular 2. (Echinicola vietnamensis KMM 6221, DSM 17526)
MIVLFLFSLVSALKAEEHSVIHLQKDVKWIPEIIQNLDYFIDTTNSLGIEQVASLEFQEK
FSHITDPHVVYGHLNDFLWIRMTVANQQQNDHYGWYFESWGYDLDEITFFSPQGESGYFP
MKAGYDYPFDDRDILHKNFNYFLNIRPGETKTYFIKIRRSYPLTFSFHLRTNDNFISHSL
NEYFFLGLYYGILVLILTLHVYLVIKLKENLYLFSSILIVSSIWFSLGRDGLGFQYLWPS
VPWINTITNFSSLTELIVIISTLLFSYFFVQKYKKTPILKPLTVAAIAIMMGMFLNQNYG
MVMDAIPYMVISFLILLVPFTIGLRSLLSIGRFSLSYTLAYVCLFLIIFHSYTRAFALFN
DPILNWYFVHPVIIIEMVLFSLSILNQIKYLQEEYKKANIEKTTALEEKNRVTYEMNNRL
HQKVKERTEEIENMATALAQKNVVLQTTNLKLEELNAQISNINRYLKENNDKLRSNVEEI
TKDMALMRGFDFEDFKKVFPNKEACLKFLSELKWQQKFVCKKCGYNKSNEDNNHGRRCKN
CNYYESPTAETLFHKLKFPIEKAFYILYLSNRKDVELTLNELSEILDLRRETCWAFKNKI
AQAMEKVGHNKDLSGWETLALVYLE