Protein Info for Echvi_2675 in Echinicola vietnamensis KMM 6221, DSM 17526

Annotation: Beta-glucosidase-related glycosidases

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 850 906 transmembrane" amino acids 23 to 42 (20 residues), see Phobius details PF00933: Glyco_hydro_3" amino acids 87 to 354 (268 residues), 164.7 bits, see alignment E=7.6e-52 PF01915: Glyco_hydro_3_C" amino acids 397 to 771 (375 residues), 212.1 bits, see alignment E=1.7e-66 PF07691: PA14" amino acids 486 to 617 (132 residues), 83.8 bits, see alignment E=2.2e-27 PF14310: Fn3-like" amino acids 807 to 875 (69 residues), 79.8 bits, see alignment 2.8e-26

Best Hits

Predicted SEED Role

"Beta-glucosidase (EC 3.2.1.21)" in subsystem Beta-Glucoside Metabolism or Fructooligosaccharides(FOS) and Raffinose Utilization (EC 3.2.1.21)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 3.2.1.21

Use Curated BLAST to search for 3.2.1.21

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See L0G226 at UniProt or InterPro

Protein Sequence (906 amino acids)

>Echvi_2675 Beta-glucosidase-related glycosidases (Echinicola vietnamensis KMM 6221, DSM 17526)
MKIETKEETPQPIIRSGVSFPKWKYLGMGLLIYLMAGIMRVNAQDGTLDFSFLDMEKNFE
ERVDILVDQMSLEEKVSQMMNASPAIPRLKVPEYNWWNECLHGVARAGYATVFPQSISVA
ASFDKNLMKDIGSVISDEARAKHHEFIRNGKRGIYTGLDFWSPNINIFRDPRWGRGHETY
GEDPYLTGELASQFIEGLQDSDGKYLKTIATSKHFAVHSGPEPLRHTFDVDVSDRDLYET
YLPAFRKTVKEAKVYSIMGAYNRFRGESCSGHDFLLNQLLREQWGFEGYVVSDCGAIQDI
HTGHKIASTAAEAAAIGVSGGCDLNCGNYYTHLTEAVAEGLISEEEIDIAVKRLFLARFR
LGMFDPEEAVSYAQIPFGIVCSEAHNTLARQAAQKSMVLLKNQKNLLPLSVDKIKRIAVI
GPNADNVESLLGNYHGIPKKPVTFLDGIKHKVGPKAEVLYTEGVHPAEGFYNLKPIPSAY
FETEDGRQGLKASYYDNLKWEGKPVLERVDDQIDFSWEHQPISKDLIDNFSVKWEGYLVP
PASGRYEFGVFSKRGMKIRIDGKEISNGSGTIHRGRYATDILSLEGGKKYKVEVTFFSDE
TNAIAQMLWAMPDVSKIDEAVAMAKSADLAVVVLGLSQRLEGESMDVVTPGFDRGDRTAI
TLPAQQEALLKAVKETGKPVILVLNAGSAMAINWAKENVDAIISAGYPGEEGGNALADVV
FGDYNPAGRLPITYYQSVEDLPPFEDYDMKGRTYRYFEGKPLYPFGYGLSYTRFSYKDLE
VPAKVNAGDPVQISVTVTNIGSRAGDEVVQLYLNDKEASTMRPIRQLEGFQRIHLKPGES
KVVNFTLSARQLSMINGESKRVIEEGVFSIHVGGEQPGFDGKLQAETTEVVTGEFQVIGN
QELADL