Protein Info for Echvi_2378 in Echinicola vietnamensis KMM 6221, DSM 17526

Annotation: Uncharacterized protein conserved in bacteria

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1200 1300 1400 1500 1600 1685 transmembrane" amino acids 12 to 33 (22 residues), see Phobius details PF04357: TamB" amino acids 1196 to 1632 (437 residues), 246.5 bits, see alignment E=5.5e-77

Best Hits

KEGG orthology group: None (inferred from 41% identity to cao:Celal_3540)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See L0G0V2 at UniProt or InterPro

Protein Sequence (1685 amino acids)

>Echvi_2378 Uncharacterized protein conserved in bacteria (Echinicola vietnamensis KMM 6221, DSM 17526)
MDKLKKVLYKFFKVFKVILLVLLVLIVGALLFIRSPWGQEIIVGKAVNYVKGKTQTEMAI
EKLYVTFTGNVFLEGLYLEDLKGDTLVYSGKLETGVEIWPLIQDGAIHVTKLEWENLTAN
VVREEKNGKFNFDFLMEAFASSDSTSTVETDTVEASGPMPEVDLGPVDFRNFNIAYQDGV
MGLAAKVDLGEIHLEMERVDLNKMAFYIRDFQFRNTSASYSQTKPFPPSEEDTTAVSPMP
VVIVDRFLVENIQANYESVPDEIAANVALGKLLVELPEADLDAQKIHLKTMELLDSNIAL
KLPKTTSENQEVATEPAEEAPFQWPGWIVDVNTIALERNRFEMTLGDEKVTPGAFNPEAM
AISDFYLQASQIYLKDGGAGMVLDRLDFTEASGFQLKEFGFQAGVTDTDVTIEELEIATG
NSAIGGDISLAFQSMDELINHPDQTGFDVQLPNIRLSGKDAYYFAPDLRADTLMKEVNKK
DFTGQLHVQGSMADMRIRKTRLNWGETTHVKLEGALKQAVDPENLQMDVKDVQFHSTRED
LIAFLDEAAYGVRFPDQIALISSIKGKLDDLVAQAAVETSDGNLFADAKYMDQEQLFFDV
QVKGEQLLMEKLLPGQGLGTLTFNIDASGSGSTMEELDATLKSTFEQLSYNDYDFSGLSL
DGQLTDGEGAVNAAFTDENLDMLLKVGVLLDSVDAQYTAALDLKGANLRNLGLTAKDIRT
RLKLQAAFRGNPAHFDVTTQVNDGLVVYDDRSFPLGELDLKAAVRPDSTSVTISSMMLNG
YLRSNSSPADISAGLQHHFEGYLKDSVLVDSTVVDTLSGEPVDLDFQMAFKPAPVLDQVF
LEGLDQMDSMDIMVKFREQEKQLQASISLPFVQYNEMTLDSLLVDVDGDGQEMVFDVGFA
GLSASPLAMGKTSFEGNVRGKGLYLNFESYDESELLYFVDAEVDYVGDTMHLHVVPEGLV
LNRQAWEVPASNQVSYSDALLKFRDFSFVHEGQHLTFSNELNESVADQVGITFEDFRLST
FMSLLNPDQLLLGGELNGDFVVENPFGATGIVADMDISEMKAMDVELGNLALRAKSEDTK
SYDFNLALKDKEIDLDVVGDYQASAEGANLNLKLDLNELQLKVLEKLLPDQFGEATGNLH
GNLAVSGTTAAPEYEGAFSFEAASLVVKMLNSKFTLPTQPLRVDDQGVYFDQYSFKDADG
NSFTLNGEVGTADMANPAFDLQLTAQNFQVLNSTREDNDLFYGKSNINADVKITGDMNLP
IVKADLKVNKGTDLTFVIPETQLEVVEREGVVLIVDRDNPNDILTKRDMENSESAFTGME
IEALLKVDPNAVFRVIVDERSGDNLMIAGEADLNLNIEPNGRMNLSGIYELSKGHYEMSL
YNLVSRKFNIVEGSTISWKGDPMDADMDITASYDVRTSASDLMATQISGVSSEVSTQYQE
RLPFIVYLNVEGELLRPQIFFQLDMPEDEQGALGGNVYSKIQQVNEEEGELNRQVFSLLV
LQKFMPATGGDGTGGGTAGLARSSVSQMLSSQLNALSSNVLGNSGFELSFDLDSYEGYQG
AQTNLNVSAQKRLFDDRLIVQVGSEMELESSNQDTQNDGAVFGNVNIEYLLTESGRYRLR
GFRKNEFESIIDGQVIVTGIAFILNREFNKFQNFWKSEERIQRESEQKAKQREAVDGKNE
ENHDE