Protein Info for Echvi_2196 in Echinicola vietnamensis KMM 6221, DSM 17526

Annotation: Acyl-CoA hydrolase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 189 PF03061: 4HBT" amino acids 30 to 104 (75 residues), 66.4 bits, see alignment E=1.2e-22

Best Hits

KEGG orthology group: None (inferred from 69% identity to mtt:Ftrac_3076)

Predicted SEED Role

"Acyl CoA thioester hydrolase family protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See L0G0B1 at UniProt or InterPro

Protein Sequence (189 amino acids)

>Echvi_2196 Acyl-CoA hydrolase (Echinicola vietnamensis KMM 6221, DSM 17526)
MSTEKDIARTSAFSRTTITELMIPSYANFGGKIHGGILLSLMDKVAYVTASKHSGAYCVT
VSVDTVDFLQPVEVGELVSLMASVNYVGNSSMVVGIKVISENVKVGNVKHTNTCYFTMVA
KGEDDKPCRVPKLILEDATDVRRFVEAIYRRKFKQNYETNLKEIKANWEKQDIDKLLEDQ
RCINQAGKH