Protein Info for Echvi_2113 in Echinicola vietnamensis KMM 6221, DSM 17526

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1165 signal peptide" amino acids 1 to 31 (31 residues), see Phobius details

Best Hits

Predicted SEED Role

"FIG00573909: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See L0FWS8 at UniProt or InterPro

Protein Sequence (1165 amino acids)

>Echvi_2113 hypothetical protein (Echinicola vietnamensis KMM 6221, DSM 17526)
MRGSWRAFLSIVCKFLVSLTGLMWSVPVMGQQPLCKWFETAASADSIYVKLDSLTALENS
ISISGKEAYQWHYNSNSGMLTVYRGEGTFSDSLQVCYRRFPYELSKTYAHRTLASDYDSM
AYFKKVKAVEGEVYDFREEIFPSGKLNKSGSLTRGVSFGNTQNVFVNSALNLQMDGQLTD
DLFIRASITDQNVPFQPQGNTQQVQDFDNVLVELYNDDFSLKAGDVVFRERNSTFLRYYK
NVQGLQMTTDYNMGDKWKASTQVGASIAKGKFNSVQLDVKEGVLGPYRIPGPDNERYIIV
MANSERVFLDGKLLKRGFNHDYIIDYNQGQVTFTTNVLITQYSRVRIDYEYSERNFSRSI
LTANHIQEHEKATFYVNYYKEQDNRNRPLFDEYTEEDKLLLAAVGDDINAAAVPRVDSVA
FDPQRILYRKVALPNPQEDISHYYEYSIDPSAAHFDVTFTEVGNGNGNYRRQEQLANGFV
YEYVPPVNGELQGNYTLYAILPAPNKKQMITAGGEVKLSPYEKIYGEAALSDQDVNLFAA
RGNEDNKGYGLKGGLVSEGRPIGWLKGYALEAATEVEYNSVNFRFIDRQRYIEFDRDWGL
SREAMEAPASEKLIMAKAGVRKDAANELSYQMNYRKRGDQLEGTQQRAKWYQQFGRRWFA
RQDLFLLQSDMPSMTSTWLRYDAEVLYRSKIFVPGYEFKVDRNQNRDIEQDSVVSSAMNF
LSHKFFIRSNDTLPFSFFADVSWREDRFPVEGSMVPDTKAFTTNYGLQKRFGAHDVMGTL
TYRRLYQLRGSESRESTVMGRLDYVSALLDNNLRNELSYAIGNGQELRREFVYLPVPTGE
GTHTWRDDNEDGIQQLEEFYLAINPEEKNYIRMFTPTDDYIQAYTTLFNYRLNAQFPDQW
RKEAGIKKMLSKFSNTTSWNVEKKITAGDFWMRVSPFANAVAPKDLVSFREVFRSTLFFN
RTSSSYGADLGIFKSSNKQLLTGGFEENQQEDWRINFRMNINRLINFRLKANMGQTVALS
DYLDNRNYHVDHLATGPELTWQPSSIFRTTFHYKFTHKENADNDEFQEIASLHELATEIR
YAKAIKTTVNALVKYTQIDYNGQVNSPVGYEMLEALTVGRNISWSINWIQKIGEGLQLNL
SYEGRDSEGLERMVHTGRMQVSALF