Protein Info for Echvi_2084 in Echinicola vietnamensis KMM 6221, DSM 17526

Annotation: Uncharacterized protein conserved in bacteria

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1200 1300 1400 1500 1563 transmembrane" amino acids 14 to 33 (20 residues), see Phobius details amino acids 44 to 63 (20 residues), see Phobius details PF04357: TamB" amino acids 1050 to 1466 (417 residues), 174.4 bits, see alignment E=4.5e-55

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See L0FZZ7 at UniProt or InterPro

Protein Sequence (1563 amino acids)

>Echvi_2084 Uncharacterized protein conserved in bacteria (Echinicola vietnamensis KMM 6221, DSM 17526)
MEKKSKVTEFLQKAWGGASRILSVPYVFFNIFLKKTIKRILKVLLYLLILFLLVAGSLHI
PFIQTIASQFLASQLSERTGFETTIQNVHVRWWDALSVQGLVVRDPQDSLMANLESVYVD
FSPSTILDPNQPGIDEIQLKGGELRFLTHEGNRLPNISHFINELNGIFAPKKNKTRESTS
QFSISRMSFEKVSLDIMDFRKDPIINGFDYTRLRFRNLVGGARNFLSKDGEISLDIRYLR
GLEANSGVEIQQLLTHFSYSKTAMEFDDLFFKSNETVIKNYLKFSYDSVGSLSDFNRQVT
IDASLDESVLDIKDLKYFTDKIPDFDDRIYLSGDVSGKVSDLHSDELLIRFGRRSALFGQ
FHIDGLPAIDSTFFQLSLVNSMVTSEDLSPYLDEQTRQEISKFKDIHFDSDFSGYLSRFR
TTGEFRTAIGNVSGRLDYLLEEESPRYYGQLSAKNLDLGILLNDPQTYQKVTLRGNLRGS
GTSLETILVNLDARISNIGINRYNYKGITTNATFGKDLFKGQLAINDPNLKMKVDGTLDL
RNAIDSARLNMKVDTAFLHQLNLTKEAYFVSGGVELDTKGTDLDKVEGIARFKDLLISHQ
GRNFTIDNFFFQSVFADETRMISLNSDLLVANISGNFHAKEVANDIQHLLRDYSDILTNS
ELDKTNGNKDDLNEYNIDINMSLHDINPILQLFEPSLYISKNTTVEGAFYQTAENTIFNF
YAGIDTIQYDSKLFLENDLDFNTAKIKNSREVLAACYINSKEQQLAPGVVFNNLSMEAIW
DESAIDFNVGIDQLNTNSYAQIKSKIELSKDQTSIVFAPSDIKILDNYWEFDPENSIIIS
PDRIDVDNLKLANNGQFLALNGRINENPEEILSFEIHDVNLDFINTFAIRKYSGTANGIF
AFNNFLQRTGAYGSLVLDSLSVNNFLIGNMEAATYFENDKINLSLTNTREAKKNIEVTGF
ISTENDQLSLKGNFSETKLDVLEPFLSDYLTEFGGTVSGDIDVSGTVDQPIVQGIGTLTG
GTVRVNYLNTHYTVDGNILFTPNEISFKGLNIADPQGNTARMSGGIAHDGFSDFILDISS
NLTNFQVLNTSLEDNSLFYGTAFASGTLDIFGAAQNLDITAKATTQPKTEIYIPLGSTEN
QAQEEFINIINVRDTTREISIEEAVEKLEIKNVRMNFVLDVTPDAYTEIQIDPRTGENIQ
GRGRGNLSLNIDTQGNFNMTGNYEIVDAKYNFSLYNIINRQFNIQPGGRISWFGDPYEGI
MDITATYKENVSLTSLQNSQTSSEFEDAQLYRRYPVQVIMDLDGPLMSPEINFDFDFSEF
PDGEAQTTISAFKNRIANDEQEKNRQVFSLIMLRRFSPEGQFNSAGIGFSNLSQLVSSQL
NALISQVDQNLEINIDLASLDETALETFQLSVAYTFLDGRLRVSRDGSFTDPQGNADLGS
IAGDWQAEYLITDDGRYRIRVYNRNNFNTFTSLQLAERVNTYGVSLSQTLLFSSFKKLFQ
NLGKKKKKEHLLINDSDDYLRDNYQEGNNLPDPGTPGTPTDSLKINIIETKPEEQNLDET
SNN