Protein Info for Echvi_1881 in Echinicola vietnamensis KMM 6221, DSM 17526

Annotation: ADP-ribose pyrophosphatase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 237 PF00293: NUDIX" amino acids 13 to 127 (115 residues), 44.6 bits, see alignment E=2.2e-15 PF19368: WHD_AraR" amino acids 149 to 225 (77 residues), 26.3 bits, see alignment E=1.1e-09 PF21906: WHD_NrtR" amino acids 152 to 210 (59 residues), 73.9 bits, see alignment E=1.4e-24

Best Hits

KEGG orthology group: None (inferred from 62% identity to shg:Sph21_1028)

Predicted SEED Role

"Hypothetical Nudix-like regulator" in subsystem NAD regulation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See L0FZG0 at UniProt or InterPro

Protein Sequence (237 amino acids)

>Echvi_1881 ADP-ribose pyrophosphatase (Echinicola vietnamensis KMM 6221, DSM 17526)
MIQYSNQTRILTAIDCIIFGFDGSDYKLLLIQRGFAPEKEKWSLMGGFLQSTESLDQAAN
RILKKLTGLEDVYMEQMHTFSRPDRDPVERTIAVAYVALIDIHKYEQQISDKFHAHWFSM
NELPHLIFDHEEMVEMAKSRLRYKAALHPILFELLPKKFTLPHLQAMYESLYETKIDKRN
FTRKVLSTNMLIKEKDKDKTSSKKGAFYYSIDESKYKNQFQTVLNFIPRNEIPTANE