Protein Info for Echvi_1693 in Echinicola vietnamensis KMM 6221, DSM 17526

Annotation: Uncharacterized protein conserved in bacteria

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 463 PF07005: SBD_N" amino acids 10 to 253 (244 residues), 202.3 bits, see alignment E=9.4e-64 PF17042: NBD_C" amino acids 279 to 453 (175 residues), 124.9 bits, see alignment E=4.8e-40

Best Hits

KEGG orthology group: None (inferred from 43% identity to met:M446_1733)

Predicted SEED Role

"Predicted pyridoxine biosynthesis protein (probably from glycolaldehide)"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See L0FY32 at UniProt or InterPro

Protein Sequence (463 amino acids)

>Echvi_1693 Uncharacterized protein conserved in bacteria (Echinicola vietnamensis KMM 6221, DSM 17526)
MREKVSPLLLAFYGDDFTGSSDALDFLSKAGVKTVLFIAPPTSAQLAKYEGVQAIGVAGM
TRSMVPEAMEHELRNAFGALKQSGARQVHYKVCSTFDSSPKIGNIGKALEVGLEAFQVPY
ASLLVAAPELGRYCAFGNLFARMGIGSQGKIYRLDRHPSMSKHPTTPADESDLRLHLAKQ
TDLKVGLVDVLAVETGGEVLAEALQHELEAGAKAVLFDAMYSRQLSAIGGLMDRAANERP
HFSVGSSGIEMALGAYWKAEGLLPKEITWDKPGKAGPMLVLSGSCSPITEGQITHARVHG
FGEVAIDPEQLVSGPKAVQQYVQEVLEIMEKGKPVIVHTACGAEDSRRAVTRKILINQGV
PPEDVSAKTADFFGQALGEIARKVAEKYPYKRLLIAGGDTSSKVARVLGIEAVEMIAPLV
PGAPLCVAHAPASPIDGMEVNFKGGQVGAEDYFVKVMEGNVGG