Protein Info for Echvi_1661 in Echinicola vietnamensis KMM 6221, DSM 17526

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 850 906 signal peptide" amino acids 1 to 32 (32 residues), see Phobius details PF19501: PcRGLX_1st" amino acids 42 to 119 (78 residues), 87.9 bits, see alignment E=4.9e-29 PF21345: PcRGLX_2nd" amino acids 131 to 487 (357 residues), 520.6 bits, see alignment E=3.1e-160 PF21346: PcRGLX_3rd" amino acids 493 to 904 (412 residues), 598.7 bits, see alignment E=1.1e-183

Best Hits

KEGG orthology group: None (inferred from 57% identity to dfe:Dfer_1641)

Predicted SEED Role

"FIG01125695: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See L0FYU1 at UniProt or InterPro

Protein Sequence (906 amino acids)

>Echvi_1661 hypothetical protein (Echinicola vietnamensis KMM 6221, DSM 17526)
MNDYSLSRRNFVKRSALFSGGLYMAPQLASAFDGGKISVQSPVDLSWLEDPKNTRFGGVT
LGVPWPKGQLKKSEFFMADDTGKQIPVQSWPLAYWPDGSIKWAGLAISQPTDMKGNWKLM
PGKGVRPEKEISVEETSASIKVDTGVIQCTVGKSGSALLKSVTRNGRESLKNGRLVLLKQ
NGILGEVEQIATALFEGEINQVTVEQDGSVRAVIKVEGKHHTSGEEAWLPFVIRFYFYAG
EANIRTMHTIIYDGDEEKDFIKGLGVRFEVPMEDELYDRHVRFAGKGEGVFGEAVRGLTG
LRRDAGEAVRQAQIKGEKTPPESSFPDSVRSRLHYIPAFGDYTLSQTSSDAFSIRKRTAS
GHAWLKSGFGDRSRGTGYIGGPAGGVAFGIRNFWQSYPAQLDIRNAETDRAEVTMWLWAP
DAPAMDLRFYHDGMGQDTYEKQLDALNITYEDYEPGFGTAKGVARTSEMQLWILDKTPSH
EAFSALANGVETPPQLMASPEYLHQVGVFGKIWDLPDTSTPTKSKIEAYLNDYFEFYKGQ
IDDHRWYGFWDYGDVMHSYDFDRHTWRYDVGGFAWDNSELSTDLWLWYYFLRTGRADVYR
MAEAMTRHTGEVDVHHLGKFAPLGSRHNVMHWGCSAKQLRISTAANRRFYYFLTGDERVG
DLMREQINAVATLKEIPPTRKVSRKSEWETEDDPHHVYAGFGTDYSAIAAAWLTEWERTG
SKEMKEKLTNSMRTIAAQPKGFFTGGSRMDLRTGVFEIQERQRAGASHLSAVFGLMEICA
ELIENIDMPEFKAAWLQYCTLYNATDEEQEKALGNALGKLNLGQGHSRLTAYAAKQTDDA
ALAERAWKEFFGGAAGYRFGKPKIYEVKGAEVLHPVEEGYISTNATAQWGLAAIQCLGLI
GDQLKE