Protein Info for Echvi_1523 in Echinicola vietnamensis KMM 6221, DSM 17526

Annotation: Predicted permeases

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 312 transmembrane" amino acids 12 to 31 (20 residues), see Phobius details amino acids 43 to 61 (19 residues), see Phobius details amino acids 71 to 90 (20 residues), see Phobius details amino acids 99 to 120 (22 residues), see Phobius details amino acids 128 to 145 (18 residues), see Phobius details amino acids 157 to 178 (22 residues), see Phobius details amino acids 190 to 207 (18 residues), see Phobius details amino acids 227 to 247 (21 residues), see Phobius details amino acids 254 to 273 (20 residues), see Phobius details amino acids 279 to 296 (18 residues), see Phobius details PF00892: EamA" amino acids 13 to 143 (131 residues), 76.5 bits, see alignment E=1.3e-25 amino acids 160 to 295 (136 residues), 49.4 bits, see alignment E=2.9e-17

Best Hits

KEGG orthology group: None (inferred from 59% identity to mtt:Ftrac_2759)

Predicted SEED Role

"Permease of the drug/metabolite transporter (DMT) superfamily" in subsystem Queuosine-Archaeosine Biosynthesis

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See L0FXK9 at UniProt or InterPro

Protein Sequence (312 amino acids)

>Echvi_1523 Predicted permeases (Echinicola vietnamensis KMM 6221, DSM 17526)
MTTNTAESQPLRSWLLLGFLSLVWGSSFILIKKGLVVFSPGEVGAYRIVSAAAVLLPLSL
PRIARLNRKQIGNLMAVGLVGSFLPAFLFAKAQTQLSSSITGVLNALTPLFVVLIGALFF
KAKITLRNGLGLLIAFVGVIILISVKEGSSLSSLSSINSYAFLVILATICYGINLNIIKH
WFEALKPVEITAISLLLALPVALGYLISQTDFIPKLLYQEGAPLAAGYLTILGVLGTAVS
LIVFNGLVKIASPVFASTVTYLIPIVAIAWGVLDGEVLLSGHFIGMIAVITGVWIGNRKK
RKKVIPATSSNV