Protein Info for Echvi_1507 in Echinicola vietnamensis KMM 6221, DSM 17526

Annotation: Predicted Zn-dependent peptidases

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 413 PF00675: Peptidase_M16" amino acids 15 to 129 (115 residues), 74.3 bits, see alignment E=1e-24 PF05193: Peptidase_M16_C" amino acids 169 to 344 (176 residues), 95 bits, see alignment E=5.3e-31

Best Hits

KEGG orthology group: None (inferred from 54% identity to sli:Slin_0019)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See L0FWT4 at UniProt or InterPro

Protein Sequence (413 amino acids)

>Echvi_1507 Predicted Zn-dependent peptidases (Echinicola vietnamensis KMM 6221, DSM 17526)
MINYEHYVLDNGLQVLIHPDHSTKMAVTNIIYKVGSRNEVPGKTGLAHYFEHLMFGGSKN
VPQFDSALERVGGECNAFTNTDITNYYITLPATNIETAFWLESDRMLQLNLGKKTVETQR
KVVIEEFKQRYLNQPYGDAMHLLRGLCYDVHPYQWPTIGKEIKDIEGFDEEDIRAFYQYH
YAPNNAILVIAGDVKEAEVLEMAKKWFGPIPAAKTSPADIPEEPKQTHKRTLYHSADVPT
DALYKAYHMPGRMQKGYLECDLITDILGFGRSSLLEQRLVKNTDIFASCHGYILGALDPG
LMVFSGNMEKGKTAEEAEKLLDEVVQEFIENTISQETLDKVKNQAEAMKTYESIQLINRA
MTLAYYTQLGSPDIYQIEYDRKTAICADQISDVAREVIQEPNASVLYYKSDKH