Protein Info for Echvi_1503 in Echinicola vietnamensis KMM 6221, DSM 17526

Annotation: Uncharacterized conserved protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 160 PF03364: Polyketide_cyc" amino acids 12 to 133 (122 residues), 25.1 bits, see alignment E=9.3e-10

Best Hits

KEGG orthology group: None (inferred from 56% identity to fte:Fluta_0305)

Predicted SEED Role

"Cell division inhibitor"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See L0FXJ0 at UniProt or InterPro

Protein Sequence (160 amino acids)

>Echvi_1503 Uncharacterized conserved protein (Echinicola vietnamensis KMM 6221, DSM 17526)
MGHYQLFSEQKIPASLDEVWDFISTPQNLKEITPDHMGFDITSKAMPEKMHPGMIISYKV
SPMLGIKMTWVTEITQVKEKAFFVDEQRIGPYAMWHHQHHLEPIAGGVLMKDIVTYQPPM
GPLGDIANALFIRKQLDTIFAYRFKAVEEKFGKFPSHTSA