Protein Info for Echvi_1142 in Echinicola vietnamensis KMM 6221, DSM 17526

Annotation: Predicted ATPase related to phosphate starvation-inducible protein PhoH

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 455 PF13638: PIN_4" amino acids 14 to 161 (148 residues), 120 bits, see alignment E=1.4e-38 PF02562: PhoH" amino acids 244 to 442 (199 residues), 166.6 bits, see alignment E=8e-53

Best Hits

KEGG orthology group: K07175, PhoH-like ATPase (inferred from 61% identity to fte:Fluta_1505)

Predicted SEED Role

"Phosphate starvation-inducible protein PhoH, predicted ATPase" in subsystem Phosphate metabolism

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See L0FWJ2 at UniProt or InterPro

Protein Sequence (455 amino acids)

>Echvi_1142 Predicted ATPase related to phosphate starvation-inducible protein PhoH (Echinicola vietnamensis KMM 6221, DSM 17526)
MPRAKKNESDRKIFVLDTSVILYAHNSIMNFAEHDVVIPITVLEELDQFKKGNDSKNFEA
REFIRLLDKLSKDKMIHKWTPLNGKTKGNFKVMMTTNDSNGKADQQNANTIFGEEKNDHK
ILNAALDLKISENGRKVILVSKDINLRLKAKSLDIQAEDYETGKIKNITELESTGKDILE
GIDPDVINQLYDNHTVEAKKVLGTRKRKTNTFYILKSEKNSVLAYYNGEENTIERVDKKL
AYNIKPKNAEQTFALHAITNPNIKLVSVQGVAGTGKTLLALAGALEQRRDYKQIFLARPI
VPLSNKDIGYLPGDIKSKLNPYMEPLWDNLKFIQNQFKESDKEYQKITEMVNQEKLVIQP
LAYIRGRSLSNIFFIVDEAQNLTPHEIKTIISRAGENTKIVFTGDVYQIDTPYLDSQSNG
LSYLIDRVKEHPLYAHIKLEKGERSELANLANELL