Protein Info for Echvi_1083 in Echinicola vietnamensis KMM 6221, DSM 17526

Annotation: N-acyl-D-aspartate/D-glutamate deacylase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 560 signal peptide" amino acids 1 to 21 (21 residues), see Phobius details PF07969: Amidohydro_3" amino acids 350 to 535 (186 residues), 59.6 bits, see alignment E=4.3e-20 PF01979: Amidohydro_1" amino acids 426 to 517 (92 residues), 29.1 bits, see alignment E=6.1e-11

Best Hits

KEGG orthology group: K06015, N-acyl-D-amino-acid deacylase [EC: 3.5.1.81] (inferred from 64% identity to hhy:Halhy_0907)

Predicted SEED Role

"N-acyl-D-amino-acid deacylase precursor (EC 3.5.1.81)" (EC 3.5.1.81)

Isozymes

No predicted isozymes

Use Curated BLAST to search for 3.5.1.81

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See L0FTX0 at UniProt or InterPro

Protein Sequence (560 amino acids)

>Echvi_1083 N-acyl-D-aspartate/D-glutamate deacylase (Echinicola vietnamensis KMM 6221, DSM 17526)
MKQHFPLILLLLLAFACHQPTDFDTIIRNGQVVDGSGKPSYIADVGIRADTVAAVGDLAD
KTADQEIDAKGLVVAPGFINMLSWAVESLIEDGRSMSDIKQGVTLEIFGEGSSWGPLTPA
TRREMKADQGKITYDIPWTTLGGYLEFLEKKGVSTNVASFVGATTLRVNTVGYEDRAPSP
QELDSMKMMVRQAMEEGALGIGSSLIYAPAFYSSTEELIALCKVASEYDGMYISHLRSEG
NKLLESLDELIEIASEANIRAEVYHLKQSGEANWSKFDEVVRKVDSARNAGLHITTDMYT
YTAGATGLDAAMPPWVQEGGYEAWAKRLQDPEIRKKVLQEMKSPAITWESLMQAAGSADK
MILVGFKNDSLKHLTGKTLAEVAELRGKSPEETAMDLVVEDGSRVGTVYFLMSEENVQKQ
LQLPWMSFGSDAQSMAAEGVFLQSSTHPRAYGNFARLLGKYVREEKVIPLEEAIYKLTHL
PATNLRIEKRGLLKPGYYADIAIFDPEKIEDKATFDQPHQYATGMVHVLVNGQQVLRQGK
HTGAFPGRAVRGPGWKGSRP