Protein Info for Echvi_0948 in Echinicola vietnamensis KMM 6221, DSM 17526

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 451 transmembrane" amino acids 15 to 35 (21 residues), see Phobius details amino acids 49 to 68 (20 residues), see Phobius details amino acids 82 to 101 (20 residues), see Phobius details amino acids 107 to 123 (17 residues), see Phobius details amino acids 135 to 153 (19 residues), see Phobius details amino acids 206 to 225 (20 residues), see Phobius details amino acids 231 to 248 (18 residues), see Phobius details amino acids 254 to 271 (18 residues), see Phobius details amino acids 278 to 299 (22 residues), see Phobius details amino acids 355 to 381 (27 residues), see Phobius details amino acids 393 to 412 (20 residues), see Phobius details amino acids 418 to 437 (20 residues), see Phobius details

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See L0FWT7 at UniProt or InterPro

Protein Sequence (451 amino acids)

>Echvi_0948 hypothetical protein (Echinicola vietnamensis KMM 6221, DSM 17526)
MVTIYQIVFKGKWEWVIFFMILFLPAYTVILSITYQATTSVLLTNVFKYMKELVLLLALL
SFILYRKNIFDDAYRLRITDKLFLLFYLLCAIFLILPIGTADFTTKAIYFKNVLIMGLMY
FFGRNTTLKDGEFRTMFMLIMVIFVSAFGLNIFEKITHLHFQHISGYALYNRVINDVEPS
GNYGLTWTFETQTAGMRLASFFSDPLDLASSCLIGFSVGLIGYLTSKREQSWLFISIMVC
ALGSLFFAASRASFASFFIMLCFIAMIFRLYGLIKFGLMLILGFVIYVVYFSSDEFYYFV
VDTLTFENASSMGHLLAWIEAFNQMVIAPLGSGLATSGNASGVTDELRIGGENQFLIFGV
QLGVLGMLLYIAILATGIWTAIQAFRYSKDTHLARIAFVAATVKVGLLLPLFTANAELYA
FVSWVSWWMIGLSVKTYNETAYNRQLILQHN