Protein Info for Echvi_0917 in Echinicola vietnamensis KMM 6221, DSM 17526

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 566 signal peptide" amino acids 1 to 23 (23 residues), see Phobius details transmembrane" amino acids 56 to 62 (7 residues), see Phobius details PF01204: Trehalase" amino acids 280 to 371 (92 residues), 24.3 bits, see alignment E=1.4e-09 PF03633: Glyco_hydro_65C" amino acids 496 to 552 (57 residues), 36.6 bits, see alignment 3e-13

Best Hits

KEGG orthology group: None (inferred from 68% identity to fjo:Fjoh_4082)

Predicted SEED Role

"FIG00654727: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See L0FX14 at UniProt or InterPro

Protein Sequence (566 amino acids)

>Echvi_0917 hypothetical protein (Echinicola vietnamensis KMM 6221, DSM 17526)
MQYSKNLHALVSYFLATRHCERSEAISHKEKGIASSSLLAMTFGNTGLSLMKIKLLSLVA
LMCCLGSCATTAEAQGPALLKKEDFKHYADYFNRMEDENITQAISNEDSWAWMEENIPLF
EAPQKNFEEIFYYRWWSLRKHIKKTPVGYAMTEFLVERSYSDKYNLISCALGHHIYESRW
LHDPKYLDQIVHTWYRGNDGQPMEKLHSFSSWTADALYHRYLVTGDEQYLLDMLPDLLKE
YQWWEDNRQREDGLFWQIDVKDGMEESLSGGRHVKNVRPTINSYMYGNAKAIAKIAALKG
DEALAKNYEDKASTIKTLVQENLWNSEDLFFETVKEEGGFAQVREAIGFIPWYFNLPEDK
NPYHAAWDQVTDEGGFLAPFGLTTAECRHPDFRTHGCCNCEWDGAIWPFATSQTMTAMAN
LLNNYHQEMVDKSDYFSLMEKYVESQYYRGRPYIGEYLDEKTGFWLKGDQERSRYYNHST
FNDMIITGLVGFRPGANGQFEVNPLVPEETWDWFCLDNIAYQGNIVTIFWDKTGEKYQKG
KGLHVLVNGQEVGRSEGLEPLALQMP