Protein Info for Echvi_0646 in Echinicola vietnamensis KMM 6221, DSM 17526

Annotation: Cyanate permease

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 392 transmembrane" amino acids 12 to 30 (19 residues), see Phobius details amino acids 50 to 69 (20 residues), see Phobius details amino acids 79 to 97 (19 residues), see Phobius details amino acids 103 to 126 (24 residues), see Phobius details amino acids 143 to 163 (21 residues), see Phobius details amino acids 165 to 165 (1 residues), see Phobius details amino acids 171 to 187 (17 residues), see Phobius details amino acids 212 to 234 (23 residues), see Phobius details amino acids 249 to 270 (22 residues), see Phobius details amino acids 278 to 296 (19 residues), see Phobius details amino acids 302 to 324 (23 residues), see Phobius details amino acids 343 to 359 (17 residues), see Phobius details amino acids 365 to 384 (20 residues), see Phobius details PF07690: MFS_1" amino acids 20 to 290 (271 residues), 72.4 bits, see alignment E=1.7e-24

Best Hits

KEGG orthology group: None (inferred from 46% identity to bck:BCO26_1311)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See L0FSM5 at UniProt or InterPro

Protein Sequence (392 amino acids)

>Echvi_0646 Cyanate permease (Echinicola vietnamensis KMM 6221, DSM 17526)
MKKTAPTKGLSEGLLITGIILVSFCLRPSITSVGPLIPMIREDLGLSNAWAGFLTTLPLL
SFATFSLFSSAIGARLGNVRAILLGLFLIAFGIYIRVQGGAFLLYFGTAVSGIGIVICNV
LLIPLIKVKLPHKIGIMTSSYTTGMSAFAAVGTGLSVPLAVGMGLGWRGSLLAWVALVAL
AIVIWLPQVKPNKVKGPDEGLTGGKNVWKSKLAWQVSIFMGIQSTMFYTLIAWLPDLLIN
KGFSAGQAGLMMSLMQVVGLIGSFTAPLVAVKYATQVKISFGMGMIYFIGFIGLFFDHSW
VIYIALTLIGFCLGASISLAYTLIGLRTEGPTTARLSGMAQSAGYYLAALGPLLIGALFD
LFANYNLLIILMVICALSFAWLGTKVGRNVKV