Protein Info for Echvi_0352 in Echinicola vietnamensis KMM 6221, DSM 17526

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1200 1300 1400 1500 1600 1675 signal peptide" amino acids 1 to 21 (21 residues), see Phobius details PF01364: Peptidase_C25" amino acids 395 to 765 (371 residues), 208.5 bits, see alignment E=1.9e-65

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See L0FTL9 at UniProt or InterPro

Protein Sequence (1675 amino acids)

>Echvi_0352 hypothetical protein (Echinicola vietnamensis KMM 6221, DSM 17526)
MKKAGFLYLLLMVWALGAKGQTEWIDYAQTYYKIPTTTDGIYRIGFAALSASGMNPSGVD
PRTFRLYHRGEEVAIYVHGQEDGRFDQGDYVEFIGERNDGTSDRPLYPQPDQMANPLYNN
HSDATVFFLTATPGQNGKRMATADFSTPADNLVNYETTVTQIFADQYSLGQTYTLGIHLG
IYDKGQGWTGPIITRGNVHDVVFKDLGTAAAGFSASAKLGMVGRSGVEHLVEVYVGASQD
ALRKVGEVTIDGYSYAEYTARLQASDIGSDGRMVVRLAPIGTTGSNDNISVSYTALTYQK
EKVLGDFDQERIGLEAGSYQMRLEQISEDYLAYDVTNPYQPLRLNVQENGANATVQMGNA
AQKAEVLVQATREVTEPTVLDRVRFRDLLGVAADYLILTHASLQQATASNTDPVAAYATY
RESAAGGGHQTLTFTAEELYNQFNYGEKSPLAVKTFLRQYAARHDPAYLLLMGRAYGMYN
STSSGGERYYYRDRPELFSIQDLVPTYGYPYNDNRFVVGLDGGDSLAETIAVGRIPARVP
EEINYYLDKVKEKEALGTSAAWQKDMVHLSGGLSAFELERYYNFVRGFENIAEGPYFGAD
VTTYRKRSNTEVELINISDKVNEGVSMVTFFGHAATSTTDIDIGFVSQDELGYHNKGKYP
VLLLNGCDAGNSFGGAYTFGEDWILTPDRGASNFMAHASIGVDVFLRRYSESFYHAAFAD
SAMIYQPIGKVKLAGDKRFFERYGTSAINQSHANQMIMLGDPAVRIFPAKEADYSLNPDE
VTLGTVDGEQVTSLADTLELAFVIKNLGIVNQDTLDYKITRQLPDGTMVNYDNQQLTPVF
YRDTVKFAVPNVGLVAAGDNVFTISLNTERAIPEITYANNTIVVNKFIPSSGTQNLSPLD
YAIHQEGSVELIAQVPGKAEEDRTIVFQMDVLPDFSSAWRKEQRVTTRGIARWRQSISDQ
INATDTVTFYWRTKFLEQREGESGAWTRSSFSYIPNGPEGWIQREFAQLAEDHLDKLMIN
EAVGQWEYLGTQREVEVFTFGPETEGLSYGQVQVELDGIPYNQDLFQRRCTNNSFGLMAF
DQRSLAPYLVIPLTNFDVLDPKSCGKTPQIIQNIRSGWINEEGQSMLLNYIDGLKDGDYV
LIFSVGQMNFEDWPDAAFLKMREIGANEATLRNLKNGDPYILFGRKGMAPGEAVEVLADK
TSEVPAAAQSISFSTQMNGFYDQGSVATRRVGPASSWAAFYNQTQSAANAGTEQFAFDVI
GVSEEGAETLLFENVVDGEVRLEEINAGLYPFLRLVYRLEESATRIPRQLAQWQVNYTGV
PEGVLLVENTEKVLKLQEGEQANVAFEFVNISNYDFTDSLTVRWSWQNKQHNTIEEFEKK
IPAVKAGESYAFDIDFDTFGKAGKNSLNVTVNPREYLEQSYKNNVLDLADYVVVAADDQD
PVLDVSFDGVYIMDGDIVSPNVLISALVKDENETLLKQDTTGVEVYLKRDCETCVFERVA
FSNPSLKWFEASENTDFKVEYQPGPLEDGVYTLRINAEDASGNKAGEKPYEVTFEVINES
TITHFYPYPNPFSTSVRFVFTVTGAVPPDEIKIQIMTVTGKVVREILQEELGPVKIGNNI
SEYAWDGKDEFGDQLANGVYIYRVLVRKDGQFVEHRATAGDKAFKKGYGKMYLLR