Protein Info for Echvi_0334 in Echinicola vietnamensis KMM 6221, DSM 17526

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1200 1300 1400 1500 1600 1700 1800 1876 signal peptide" amino acids 1 to 32 (32 residues), see Phobius details PF13585: CHU_C" amino acids 1797 to 1862 (66 residues), 29.6 bits, see alignment (E = 6e-11)

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See L0FVE2 at UniProt or InterPro

Protein Sequence (1876 amino acids)

>Echvi_0334 hypothetical protein (Echinicola vietnamensis KMM 6221, DSM 17526)
MKRTPFDINLRFIYLFLPLFLCLRFSVHVHGQGYNDNEWIFGYCGPNTENNYISFGKGDN
PNVNTLPGTVVVGQDNNAIAIDPLTGEPIFYTNGELVYDGDNGPLEGMSPGINGDINGNQ
TVAISSLNFDIEGEKTYYIFYLSTSDQLQYAVVDMNAPGQATGNEPPRGEITDKDIQFGT
AAGAIAVVKTPSSPSYLISYENGQLLSREITDTEGVFNETGNAALGFTPEKIAFDENSGT
LALIPENAVDPIVLMDFDTSTGNFANPRPLDQSTGDASENYGGTGLAPDGDYFYYSKDDQ
LLRIPVDTLDADPQVVPITSPSGSTIRQIHDIKVGPDGQLYYIYQEEDDDAFYVGTVENP
DHTVLEELTVDDNPFDGTDFCGSTFPSFAPNADIDVSVDFTYSPQMPCMNNPLQLTSQLT
PPNIAVESYEWELSPPPTDQDGEEIELDLTEEHLLLPADATSEQNINVTLTVTLADGSTQ
TASQSITFQENNLQASFTPSDTTTCMTCIDLNEMLEVSSGEEGQGGSGGGGGGGGGIPGI
PGGGSGGGQNGGSSYEYFWSNKKEEGWIPEGANEVCDPGTYWVLAREQGSSCYVYAETTV
KMWDPVANEKVDDQTNNVWYFGNNAGLDFNPDPDDPDAPSPRPVEVPDGHPGWSIPEGTT
TISDQAGDVLFYTDGQTVWDLNGNPMQDGENIGGDNTSAQSVIAVKVPQEQTLYYLFTTQ
SEGGNSTTKFSLVDIKGENQNGVGSVVSGDNFLFSPGTEQSAAIASGDTTWVMFHEVGNN
TFRAYPATSQGIGQPVTSDVGTNHSFSNSAGTMKFSPDGEKVAVTIVDENGCSFVDVLDF
DEETGELSEYATIDLGCEDEVYGLEFGGDSNKIFVSYQNGKGLEEYQIQAPEDDDDDDGG
GNNCPTCFENAADQAALEQCIQDNVNVLANSAGTNFGAVQMGPNGQIYVAIPGATNIGTI
NPGADCNNSNYSQQQAVSTTGGTSNLGLPAYAQNSGSNIPDPEIAGPESLCLQDGIALGE
FEGGGEPDIDTYTWTILDSEDQTVFTTSGPGDEFQILEYEFDSAGVYQVTLDVERCGNPD
YYNGELTVEVIGPPPLTLTDDITLCSGSPITLTAIDDYDPAEGLYLFEWTNAAGEILGNT
NSIEVTEESIYTVSVVLANSEEEDPAFQACSASSSVFVGPAFDFELNQDAESSCYEENYI
NFAPDTPVSGEWSYQLQGSTEDPTVLGEGYEWEVAVEELPAPGTYDIIFRAVDPILEGCI
VEKRATLVVDPLPEFTINVITPTSECDNPSGSFEFTMLADAETVTIEEIDQEFSNVAEGE
TIGPFEDLPPGVYTITAENEGCTYTETVSIENTSPPDGLDDYSIVTSAERCTNDGILDGN
ILITFPADGTITEANYTITREEDGQQFTGSTADMPLAVPHGTYAIEISTPDGCAVAAPQT
YEIQEKALVSFSVPSAPLACEIFFFEPENADVIDYTITAPDGAEITPQPNGLYPLDQEGL
YLVRGEDPNGVDCPRTREMDLTLTGQVDYELEGPFYDCETGLRYEAVIAPGFDEADYVYL
WRTFPQGEIIGRERIFTPTREGAYTLDVQPKTGTGCPAPWIEFDVPVIVRNVPVELTLEA
GICSDNPEGTIRADFEAPASANIAVAWFRTDQNGINIRMPEFDGSSTITVTQAGQYQVQL
INSTNGQECTVGSDEITVLNSDAEPPQLAESYTICAAEGVTETLEPEGNWTAYEWWREDQ
LMSTDPTFTPTEEGDYTLIVTDAAACSFAVTFEVIEDCGLKVTTPDAIIPGDPERNFVVY
VNDFVDEISVLIYNRWGELIFHCIQENIPENAPFCPWDGKVNDKKVPVGTYPVVIKLKSN
AQGVEQTIKKAIVVIE