Protein Info for Echvi_0332 in Echinicola vietnamensis KMM 6221, DSM 17526

Annotation: Zn-dependent protease with chaperone function

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 410 transmembrane" amino acids 6 to 23 (18 residues), see Phobius details amino acids 62 to 83 (22 residues), see Phobius details amino acids 98 to 117 (20 residues), see Phobius details amino acids 148 to 168 (21 residues), see Phobius details amino acids 174 to 194 (21 residues), see Phobius details amino acids 289 to 308 (20 residues), see Phobius details amino acids 328 to 349 (22 residues), see Phobius details PF16491: Peptidase_M48_N" amino acids 28 to 203 (176 residues), 189.2 bits, see alignment E=6.4e-60 PF01435: Peptidase_M48" amino acids 207 to 409 (203 residues), 126.6 bits, see alignment E=1.1e-40

Best Hits

KEGG orthology group: K06013, STE24 endopeptidase [EC: 3.4.24.84] (inferred from 50% identity to rbi:RB2501_01750)

Predicted SEED Role

"CAAX prenyl protease 1, putative"

Isozymes

No predicted isozymes

Use Curated BLAST to search for 3.4.24.84

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See L0FUC8 at UniProt or InterPro

Protein Sequence (410 amino acids)

>Echvi_0332 Zn-dependent protease with chaperone function (Echinicola vietnamensis KMM 6221, DSM 17526)
MNAEQLKYLLIGLVVAGFLFDKWTSWLNVRQPVPPVPDTLRGHLSQEKLQESKNYQRTNY
RFGLLTSGLSFLVTVACLQWGVFGWLDAWVSTGVAAPLWQSLLFFGILFLASDLLSLPFD
YYHTFKIEADFGFNKTTKKTFVLDKLKGYALGIILGGGLLALLLWLINGLGSGFWWYFWA
VAAFFMVLINLFYTSWILPLFNKLTPLEEGPLKKSILAYASSVGFSLDNVFVIDGSTRST
KANAFFSGMGKRKKVVLYDTLIAQHTTEELTAVLAHEIGHYKKKHILQSMVISVLQIGVM
LFVLSLFVNSETISLALGGERVAVHLNLIGFVLLFSPISTLLGIGMNMLSRKNEFEADRY
AKETYAAKPLAEGLKTLSVKTLTQINPHPLHVFVNYSHPPLMQRLEQLEN