Protein Info for Echvi_0307 in Echinicola vietnamensis KMM 6221, DSM 17526

Annotation: cell division protein FtsA

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 433 TIGR01174: cell division protein FtsA" amino acids 6 to 378 (373 residues), 396.4 bits, see alignment E=6.6e-123 PF14450: FtsA" amino acids 8 to 188 (181 residues), 38.2 bits, see alignment E=3.5e-13 amino acids 206 to 375 (170 residues), 121.3 bits, see alignment E=6.7e-39 PF02491: SHS2_FTSA" amino acids 82 to 161 (80 residues), 96.3 bits, see alignment E=2.2e-31 PF06723: MreB_Mbl" amino acids 177 to 350 (174 residues), 51.6 bits, see alignment E=1.3e-17

Best Hits

Swiss-Prot: 43% identical to FTSA_PSEAE: Cell division protein FtsA (ftsA) from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)

KEGG orthology group: K03590, cell division protein FtsA (inferred from 71% identity to mtt:Ftrac_3296)

Predicted SEED Role

"Cell division protein FtsA" in subsystem Bacterial Cell Division or Bacterial Cytoskeleton

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See L0FUA9 at UniProt or InterPro

Protein Sequence (433 amino acids)

>Echvi_0307 cell division protein FtsA (Echinicola vietnamensis KMM 6221, DSM 17526)
METEKLIVGLDIGTTKICAIIGRKNEFGKLEVLGMGKAVSDGVIRGIVTNIDKTVNAIQK
AVNEASDMAEVDIREVIVGIAGQHIRSSVHHGVIIRNTKDDEITIEDVRRLSNDMENIVV
PPGNTIIHVMPQDYTVDYEDGIKDPVGMSGARLEADFHIITAQTTAINNINRCVKRADLH
SQDLILEPLASSLSVLSDLDKEAGCCLVDIGGGTTDIAIFYDNIIRHTAVIPFGGNIITS
DIKEGCMVMQNQAELLKTKFGRAIAEEANPNEIVSIPGLRNRPPKEISVKNLAHIIEARM
EEIIEMVQSEIVASGLYKKLAGGIVLTGGGSQLQGVGQLFEYMTGLDTRIGYPNEHLGKS
KIEEVKSPMFATTVGLVLAGFKALDDREDVYRQRQVPGKPDKRAELPGKDIFGSIRRRLK
DFITDDLGDEENY