Protein Info for Echvi_0283 in Echinicola vietnamensis KMM 6221, DSM 17526

Annotation: PAP2 superfamily.

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 448 signal peptide" amino acids 1 to 23 (23 residues), see Phobius details PF01569: PAP2" amino acids 309 to 420 (112 residues), 37.1 bits, see alignment E=1.3e-13

Best Hits

KEGG orthology group: None (inferred from 65% identity to dfe:Dfer_4739)

Predicted SEED Role

"FIG00652090: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See L0FRN2 at UniProt or InterPro

Protein Sequence (448 amino acids)

>Echvi_0283 PAP2 superfamily. (Echinicola vietnamensis KMM 6221, DSM 17526)
MKRINFHLLYCFLLATLASCQSDKQHIPELPTKYIGEVTQEMTELMIHDVTNPPLAARFF
SYACITGYEITSQNDSSLHDLHGILNQYPAIQKPTDFPEQSYQLSAVLGMIQTAKTIQPS
GTELQRYEDALLDSCRKMGFPEETIQQSLAYAKAMTKAVLEYAKADGYNLISNYPRYTPL
GTPGSWYPTPPGYFAPVEPYFETVRPFFLDSAAQFKPLPPIAFAETKDSEFYKITKEVYD
VDMSEKNKEIAAFWDCNPFALQDNGHLMVGMKKISPGAHWMGITNIACQKAKSSFSESMK
IHTMVATTLMDGFIACWDEKYRSNRIRPETAIRKYIDPTWTPFLQTPPFPEYLSGHSTIS
TAAAAVLTHYFGDNFSYSDTVEERYGLKARSYTSFNQAANEAAISRLYGGIHFMDAITRG
QKQGREVGAWVIDKLPQTDLDAAQAAKN