Protein Info for Echvi_0212 in Echinicola vietnamensis KMM 6221, DSM 17526

Annotation: Sulfite oxidase and related enzymes

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 415 signal peptide" amino acids 1 to 36 (36 residues), see Phobius details PF00174: Oxidored_molyb" amino acids 97 to 268 (172 residues), 163 bits, see alignment E=5.1e-52 PF03404: Mo-co_dimer" amino acids 296 to 414 (119 residues), 60 bits, see alignment E=2.6e-20

Best Hits

KEGG orthology group: K07147, (no description) (inferred from 68% identity to cly:Celly_3002)

Predicted SEED Role

"putative molybdenum containing oxidoreductase"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See L0FU30 at UniProt or InterPro

Protein Sequence (415 amino acids)

>Echvi_0212 Sulfite oxidase and related enzymes (Echinicola vietnamensis KMM 6221, DSM 17526)
MKNKQTPSAGSRRKFLRNSALATIATAVGAKVVFASSMPEGYIPVVLQDDDPYKLFNKDK
GLIVLNNKPWNIESQPHLLDDKVTPADKMFIRNNGLIPESLDEGTWELVFDGEAVASPKT
YSLKTLKEKFEHFTYQLTLECGGNGRSEFYPPASGNQWKTGAVSCASWTGVRLRDVLEDV
GITDQAVYIGYHSADTHLSGNPDKAPISRGVPIAKALQEETLLAFEMNGGPIPLAHGFPL
RLVAGGFPASASGKWLKGISVRDKVHDGAKMAAPSYRVPCKSVAPGEEVAEEDMCIIESM
PVKSLITYPKSGAMIGLGDSLEVRGHAWAGELSVSELHVSIDFGATWRACKLDPPVNRLA
WQHFSTTLSFPEEGYYEVWAKATDSNGVSQPMVVPGWNPKGYLNNACHRIAVKVG