Protein Info for EX28DRAFT_4180 in Enterobacter asburiae PDN3

Annotation: conserved hypothetical metal-binding protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 25 50 66 TIGR02443: conserved hypothetical protein" amino acids 3 to 60 (58 residues), 106.1 bits, see alignment E=3e-35 PF09526: DUF2387" amino acids 3 to 57 (55 residues), 68.4 bits, see alignment E=2.2e-23

Best Hits

Swiss-Prot: 91% identical to YHEV_ECO57: Uncharacterized protein YheV (yheV) from Escherichia coli O157:H7

KEGG orthology group: K07070, (no description) (inferred from 91% identity to eco:b4551)

Predicted SEED Role

"Putative cytoplasmic protein ,probably associated with Glutathione-regulated potassium-efflux" in subsystem Potassium homeostasis

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (66 amino acids)

>EX28DRAFT_4180 conserved hypothetical metal-binding protein (Enterobacter asburiae PDN3)
MAVRKRFIAGAKCPTCQAQDTLAMWRENNIDVVECVKCGHQMREADKEARDHVRKEEQVI
GIFHPD