Protein Info for EX28DRAFT_4058 in Enterobacter asburiae PDN3

Annotation: Acetyltransferases, including N-acetylases of ribosomal proteins

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 179 PF13302: Acetyltransf_3" amino acids 8 to 146 (139 residues), 94.1 bits, see alignment E=2e-30 PF13420: Acetyltransf_4" amino acids 22 to 162 (141 residues), 29.4 bits, see alignment E=1.2e-10 PF00583: Acetyltransf_1" amino acids 45 to 142 (98 residues), 48.7 bits, see alignment E=1.3e-16

Best Hits

KEGG orthology group: None (inferred from 86% identity to enc:ECL_04920)

Predicted SEED Role

"GCN5-related N-acetyltransferase"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (179 amino acids)

>EX28DRAFT_4058 Acetyltransferases, including N-acetylases of ribosomal proteins (Enterobacter asburiae PDN3)
MPVLITSRLTCSPLQEQDWPFFLALQQHPDVMRFVAEDRPVAAIREAFDSRLTPWAPGSA
HWLCLVVRDTASHTPLGVTGYIHREEDCAEVGFLFAPEAQGKGYGFESLKALCDYAFHQG
GIRRLTATVTAGNVASRRLLEKARFRLEGELRESYYLAGRWQNDWLFGLLQQEYLNNNS