Protein Info for EX28DRAFT_3924 in Enterobacter asburiae PDN3
Annotation: hydroxyisourate hydrolase
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 56% identical to HIUH_SALDU: 5-hydroxyisourate hydrolase (hiuH) from Salmonella dublin
KEGG orthology group: K07127, 5-hydroxyisourate hydrolase [EC: 3.5.2.17] (inferred from 94% identity to enc:ECL_00086)MetaCyc: 56% identical to hydroxyisourate hydrolase / transthyretin-related protein (Escherichia coli K-12 substr. MG1655)
Hydroxyisourate hydrolase. [EC: 3.5.2.17]
Predicted SEED Role
"Transthyretin family protein"
MetaCyc Pathways
- ureide biosynthesis (6/7 steps found)
- urate conversion to allantoin I (3/3 steps found)
- urate conversion to allantoin II (3/3 steps found)
- urate conversion to allantoin III (2/3 steps found)
- superpathway of purines degradation in plants (11/18 steps found)
KEGG Metabolic Maps
Isozymes
Compare fitness of predicted isozymes for: 3.5.2.17
Use Curated BLAST to search for 3.5.2.17
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
Find the best match in UniProt
Protein Sequence (136 amino acids)
>EX28DRAFT_3924 hydroxyisourate hydrolase (Enterobacter asburiae PDN3) MKKTAPLLILASMAFAPAAFSAPAGTLSVHILDQQTGMPPSDVTVTLEKQQQDKWTPIAS GKTDHDGRIKSLYPQDQDMQPGVYKVTFKTADYFHGKKLDSFFPEIPVLFTVTRTNEKLH IPLLLSQYGYSTYKGS