Protein Info for EX28DRAFT_3867 in Enterobacter asburiae PDN3

Annotation: Glycosyl transferases group 1

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 401 PF20706: GT4-conflict" amino acids 201 to 343 (143 residues), 27.1 bits, see alignment E=5.3e-10 PF00534: Glycos_transf_1" amino acids 210 to 379 (170 residues), 119.4 bits, see alignment E=3e-38 PF13692: Glyco_trans_1_4" amino acids 226 to 366 (141 residues), 94.9 bits, see alignment E=1.3e-30 PF13524: Glyco_trans_1_2" amino acids 310 to 384 (75 residues), 30.5 bits, see alignment E=8.6e-11

Best Hits

KEGG orthology group: None (inferred from 89% identity to enc:ECL_00147)

Predicted SEED Role

"glycosyl transferase, group 1"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (401 amino acids)

>EX28DRAFT_3867 Glycosyl transferases group 1 (Enterobacter asburiae PDN3)
MPHKSKILLLDTGKEWGGGTNSMLELLKRINRDKFDITCCFYSDYSRAEGETIGQVLNGI
GIPLIVIPQRQQPVWAKLLKEAGRSLLFFSRGARKAFTRHVDIMWRIRPNVSKIETLFTQ
GGFDTLYMNNQPGSNEEGYLAAANLQARVIQHCRIEPVLTPPLVKLVNAHATKIIAVSHG
VERVLLQHGVRPELCTTVNNAIDIHQPLPDRRAMRQRLNIDDDTFVFGSIGSLIPRKANH
HTLEALAQFSQKHPQAKWKMVLVGEGAERRALTEQARALGIESRVIFTGFQNTPFDYLAT
FDAFILASKSEGLPRVVLEAMLLNIPVIGSQVTGTAELIDHDSTGLLFPWSDVSQLAQHL
DNIWADAELRARLAAAAYQNVCHTYAIENYVSGVEAVLGAH