Protein Info for EX28DRAFT_3748 in Enterobacter asburiae PDN3

Annotation: 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 232 TIGR01704: MTA/SAH nucleosidase" amino acids 2 to 229 (228 residues), 439.8 bits, see alignment E=1e-136 PF01048: PNP_UDP_1" amino acids 2 to 226 (225 residues), 185 bits, see alignment E=7.3e-59

Best Hits

Swiss-Prot: 94% identical to MTNN_ENT38: 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase (mtnN) from Enterobacter sp. (strain 638)

KEGG orthology group: K01243, S-adenosylhomocysteine/5'-methylthioadenosine nucleosidase [EC: 3.2.2.9] (inferred from 97% identity to enc:ECL_00963)

MetaCyc: 94% identical to adenosylhomocysteine nucleosidase (Escherichia coli ATCC 25922)
Methylthioadenosine nucleosidase. [EC: 3.2.2.16, 3.2.2.9]; 3.2.2.9 [EC: 3.2.2.16, 3.2.2.9]; 3.2.2.9 [EC: 3.2.2.16, 3.2.2.9]

Predicted SEED Role

"5'-methylthioadenosine nucleosidase (EC 3.2.2.16) / S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)" in subsystem Adenosyl nucleosidases or Methionine Salvage or Polyamine Metabolism or Methionine Biosynthesis or Methionine Degradation (EC 3.2.2.16, EC 3.2.2.9)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 3.2.2.16 or 3.2.2.9

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (232 amino acids)

>EX28DRAFT_3748 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase (Enterobacter asburiae PDN3)
MKIGIIGAMEEEVTLLRDKIENRQTLSLGGCEIYTGQLNGVDVALLKSGIGKVAAALGAT
LLLERCKPDVIVNTGSAGGLAPTLKVGDIVVSDEARYHDADVTAFGYEYGQLPGCPAGFK
ADDKLIAAAETCIAELNLNAVRGLIVSGDAFINGSVGLAKIRHNFPQAVAVEMEATAIAH
VCHNFSVPFVVVRAISDVADQQSHISFDEFLTVAAKQSTVMVERLVQNLARG