Protein Info for EX28DRAFT_3553 in Enterobacter asburiae PDN3

Annotation: Uncharacterized secreted protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 318 signal peptide" amino acids 1 to 20 (20 residues), see Phobius details PF05229: SCPU" amino acids 16 to 144 (129 residues), 22.9 bits, see alignment E=4.7e-09 amino acids 184 to 315 (132 residues), 83.8 bits, see alignment E=7.3e-28

Best Hits

KEGG orthology group: None (inferred from 70% identity to eae:EAE_24720)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (318 amino acids)

>EX28DRAFT_3553 Uncharacterized secreted protein (Enterobacter asburiae PDN3)
MSLRAPLLLLLVLSVKAMAAACWITSTPAINFGNVVAGNTTSVNTEVKFSCQADNEGRTE
FINVCLSSVDAPPFEMISPGDQEGKQYTLLFRLLNGAARSQELGPASSGNLIQQTLAAES
NANVSGTFPLIATIPAGQSQLPAYHYYNYNMNLRIAWHSAVRQDALQNCSDGSAEGEQVQ
GGTNAQAEISQGCYIERVTPLNFGTLTSTATLRPTRSTATLTTRCPAGTAFTLAMGKGNH
ASGNQRQLCNNEGQCLRYGLWQDESATQRWGDQSSGDALQVTNPAGGTQNYTVYGEVPAQ
PLTGTGEFIDDVIITLTY