Protein Info for EX28DRAFT_2847 in Enterobacter asburiae PDN3

Annotation: sulfate adenylyltransferase, large subunit

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 474 PF00009: GTP_EFTU" amino acids 26 to 233 (208 residues), 159 bits, see alignment E=1.6e-50 TIGR02034: sulfate adenylyltransferase, large subunit" amino acids 28 to 434 (407 residues), 690.5 bits, see alignment E=7.9e-212 TIGR00231: small GTP-binding protein domain" amino acids 34 to 214 (181 residues), 50.2 bits, see alignment E=2.5e-17 PF01926: MMR_HSR1" amino acids 86 to 169 (84 residues), 23 bits, see alignment E=1.1e-08 PF03144: GTP_EFTU_D2" amino acids 265 to 324 (60 residues), 31 bits, see alignment E=4.2e-11

Best Hits

Swiss-Prot: 89% identical to CYSN_CITK8: Sulfate adenylyltransferase subunit 1 (cysN) from Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696)

KEGG orthology group: K00956, sulfate adenylyltransferase subunit 1 [EC: 2.7.7.4] (inferred from 96% identity to enc:ECL_04100)

MetaCyc: 88% identical to sulfate adenylyltransferase subunit 1 (Escherichia coli K-12 substr. MG1655)
Sulfate adenylyltransferase. [EC: 2.7.7.4]

Predicted SEED Role

"Sulfate adenylyltransferase subunit 1 (EC 2.7.7.4)" in subsystem Cysteine Biosynthesis (EC 2.7.7.4)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 2.7.7.4

Use Curated BLAST to search for 2.7.7.4

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (474 amino acids)

>EX28DRAFT_2847 sulfate adenylyltransferase, large subunit (Enterobacter asburiae PDN3)
MNTTIAQQIANEGGVEAYLHAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTRQIYEDQLS
SLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQY
TRNMATGASTCDLAILLMDARKGVLDQTRRHSFISTLLGIKHLVVAVNKMDLVNFSEDKF
EEIRQSYLTFAEQLPGNLDIRFVPLSALEGDNVASQSANMPWYSGPTLLEVLETVEIQRV
VDTQPMRFPVQYVNRPNLDFRGFSGTLASGSVKVGQRVKVLPSSVESTIARIVTFDGDLQ
EAGAGEAVTLVLKDEIDISRGDLLVDAQETLAAVQGASVDVVWMAEQPLTAGQSYDIKIA
GKKTRARVDGIQFQVDINNLTQRDVTELPLNGIGLVDLTFDEPLVLDPYQQNPVTGGLIF
IDRLTNVTVGAGMVREPIKQSAATSEFSAFELELNALVRKHFPHWGARDLLGGK