Protein Info for EX28DRAFT_2707 in Enterobacter asburiae PDN3

Annotation: Uncharacterized iron-regulated membrane protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 456 transmembrane" amino acids 18 to 41 (24 residues), see Phobius details amino acids 117 to 133 (17 residues), see Phobius details amino acids 156 to 177 (22 residues), see Phobius details amino acids 198 to 218 (21 residues), see Phobius details amino acids 353 to 379 (27 residues), see Phobius details amino acids 391 to 408 (18 residues), see Phobius details amino acids 414 to 437 (24 residues), see Phobius details PF03929: PepSY_TM" amino acids 15 to 385 (371 residues), 215.8 bits, see alignment E=6.2e-68

Best Hits

KEGG orthology group: None (inferred from 87% identity to enc:ECL_03937)

Predicted SEED Role

"Uncharacterized iron-regulated membrane protein; Iron-uptake factor PiuB"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (456 amino acids)

>EX28DRAFT_2707 Uncharacterized iron-regulated membrane protein (Enterobacter asburiae PDN3)
MTTCTPRAAWGNLLRRLHFYVGLFVGPFIFFAALTGTLYVATPQLENALYRHALHTNSVG
ELQPLAGQIAVAEKTVGSDLHLHAVRPGLAEGETTRVMFAEPTLGPSENRAIFIDPVSLA
VLGDMTVYGTSGILPLRQTIDYLHTSLMLGDVGRLYSELAASWMWVAALGGVGLWFYTRP
KRRINNRFQNRRRLHVTLGWSLLGGMLLFSATGLTWSQWAGGNVDRLRAEMNWLTPQVNT
TLSGQHETVDEHAEHRGHHGGKMMPEMAMDLTQFDGVLNAARNAGIDANRLEIRPAKTAD
SAWTVTEIDRSWPTQVDAVAVDPSTMQVLDRTRFEDFPLMAKLTRWGVDFHMGILFGLVN
QLLLVAFGLALCVLIIWGYRMWWMRRPAQSAVSPVQTLCQSWLALSGWGRGVTVIISVLL
GLALPVMGVSLALFVLVDWLRWRAATRVTLAETSAK