Protein Info for EX28DRAFT_2570 in Enterobacter asburiae PDN3

Annotation: Predicted membrane protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 871 transmembrane" amino acids 6 to 27 (22 residues), see Phobius details amino acids 125 to 144 (20 residues), see Phobius details amino acids 153 to 173 (21 residues), see Phobius details amino acids 180 to 200 (21 residues), see Phobius details amino acids 206 to 227 (22 residues), see Phobius details amino acids 232 to 250 (19 residues), see Phobius details amino acids 256 to 275 (20 residues), see Phobius details amino acids 282 to 300 (19 residues), see Phobius details amino acids 311 to 330 (20 residues), see Phobius details amino acids 340 to 359 (20 residues), see Phobius details amino acids 365 to 386 (22 residues), see Phobius details amino acids 396 to 414 (19 residues), see Phobius details amino acids 420 to 437 (18 residues), see Phobius details amino acids 444 to 463 (20 residues), see Phobius details amino acids 469 to 490 (22 residues), see Phobius details amino acids 500 to 520 (21 residues), see Phobius details amino acids 527 to 544 (18 residues), see Phobius details amino acids 557 to 574 (18 residues), see Phobius details amino acids 580 to 599 (20 residues), see Phobius details amino acids 611 to 633 (23 residues), see Phobius details amino acids 640 to 664 (25 residues), see Phobius details amino acids 676 to 699 (24 residues), see Phobius details amino acids 719 to 738 (20 residues), see Phobius details amino acids 750 to 772 (23 residues), see Phobius details amino acids 787 to 807 (21 residues), see Phobius details amino acids 816 to 833 (18 residues), see Phobius details amino acids 844 to 862 (19 residues), see Phobius details PF10101: DUF2339" amino acids 121 to 517 (397 residues), 329.4 bits, see alignment E=3e-102 amino acids 531 to 864 (334 residues), 147.3 bits, see alignment E=3.8e-47

Best Hits

KEGG orthology group: None (inferred from 73% identity to cro:ROD_04491)

Predicted SEED Role

"FIG00509783: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (871 amino acids)

>EX28DRAFT_2570 Predicted membrane protein (Enterobacter asburiae PDN3)
MDELYILGCLFLVFALVVAPVLAVIGFNRSTAARQEIARLRQRIEALEQRGVPESAPEPV
QATAPVAVTAPAVKDAPAPVDPWRPDTPAAVADPAPAHAPAAKQPSAFGGILTSLVRWFM
QGNPLAKLGILLLFLGLSFLLRYTVEHSLFPLELRLVATALFAIVLLAVGWRLRQKQRVY
ALILQGGATGVLYLTVFGAFRLWQMLPMTLAFALLVVICAASVGLAVLQKALSLAMLASL
GGYLAPLLLSTGGGSFVALFSFYLLLSIGILAISIWQHWRELNLLGLLFTFGVGGLWGLN
DYQPEDYWVCQLFLIANTLIFGVLSVALSLRAQEKGKQIIDGVLLFAPPLIGFGMQYGMT
RHWEYGPAMSALGYGAFYLALAFLALRRYPSIGRPLVMAALAIGGGFATLAIPLALSARW
TAMAWALEGLGILWLGVQQHQRRMSYSGTALLVLALGSALWAQTNGVTSLSLLLIFTILS
LCWLAAAWLWRTLFLPVSRVLLAGGLLFWLVALLGASRLVLTQELPILAGVLALTAASVW
GWRQAAARLAWRELDASKWLLWSVMLLMVGYQLWHQQIVAAGWSNLAWCVALPAALMLLR
RDGERLLPRIAMGLHLSLFWMILLALAAELYWFARSLPWGMAAWGSGVAMAAGGGVIIAL
SAAVRRRGWPFREWPALYACLAPIPVVVALLVLLVATNFQDGVVYRQTWLPLVNPLEEGA
AFALLGLVVFYRAVDRYYPAWLSQARPWPAVAMMAFGFWWLNGALMRALAWYGDVAWNMA
SLWDSRLIQTSFALFWMLSALVVMIHATRRASRQEWLCGAALLGVVMVKLMLVDSAGGGG
LSRAVAFIGVAILVLIVGYFSPLPPKTGDEK