Protein Info for EX28DRAFT_2394 in Enterobacter asburiae PDN3

Annotation: Acetyltransferases, including N-acetylases of ribosomal proteins

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 232 PF13302: Acetyltransf_3" amino acids 36 to 173 (138 residues), 60.5 bits, see alignment E=3.1e-20 PF00583: Acetyltransf_1" amino acids 67 to 172 (106 residues), 30.4 bits, see alignment E=4.3e-11

Best Hits

Swiss-Prot: 40% identical to YIW2_YEAST: Uncharacterized protein YIR042C (YIR042C) from Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

KEGG orthology group: None (inferred from 84% identity to ent:Ent638_1106)

Predicted SEED Role

"GCN5-related N-acetyltransferase"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (232 amino acids)

>EX28DRAFT_2394 Acetyltransferases, including N-acetylases of ribosomal proteins (Enterobacter asburiae PDN3)
MPEINQHGQTVNDIVPDWRGARVLTRTPLFGQYCRLEPLDADRHAADLYEAYALGDDSDW
TWLASTQPASVEATAHWIVAKVMDDELVPFAVIDLRTERAVGLVSYMANERLLGSVEIGH
VTWSRKMKGTRMGTETVWLLLKNAFEHGYRRVEWKCDSMNIASRNAAERLGFVWEGRLRQ
KLVRKGRNRDSDMLSIIDREWPQRDAELRAWLAAENFDGEGRQIKRLEAFRL