Protein Info for EX28DRAFT_2215 in Enterobacter asburiae PDN3
Annotation: 8-amino-7-oxononanoate synthase
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 80% identical to BIOF_ENT38: 8-amino-7-oxononanoate synthase (bioF) from Enterobacter sp. (strain 638)
KEGG orthology group: K00652, 8-amino-7-oxononanoate synthase [EC: 2.3.1.47] (inferred from 87% identity to enc:ECL_02960)MetaCyc: 74% identical to 8-amino-7-oxononanoate synthase (Escherichia coli K-12 substr. MG1655)
8-amino-7-oxononanoate synthase. [EC: 2.3.1.47]; 2.3.1.47 [EC: 2.3.1.47]
Predicted SEED Role
"8-amino-7-oxononanoate synthase (EC 2.3.1.47)" in subsystem Biotin biosynthesis (EC 2.3.1.47)
MetaCyc Pathways
- biotin biosynthesis I (15/15 steps found)
- 8-amino-7-oxononanoate biosynthesis I (11/11 steps found)
- 8-amino-7-oxononanoate biosynthesis IV (4/5 steps found)
- biotin biosynthesis II (4/6 steps found)
- 8-amino-7-oxononanoate biosynthesis II (1/2 steps found)
- 8-amino-7-oxononanoate biosynthesis III (1/2 steps found)
KEGG Metabolic Maps
Isozymes
No predicted isozymesUse Curated BLAST to search for 2.3.1.47
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
Find the best match in UniProt
Protein Sequence (385 amino acids)
>EX28DRAFT_2215 8-amino-7-oxononanoate synthase (Enterobacter asburiae PDN3) MTWQARINTALDERRAAEAFRVRRVVENGAGRFLTREGRQFCNFSSNDYLGLSQHPAIVR AWQQGAERFGVGSGGSGHVSGYTTAHQALEEALADWLGYPRALLFISGFAANQAVITALM GKEDRIVADRLSHASLLEAANLSPAQLRRFAHNDAGQLAALLDKPCDGQQLAVTEGVFSM DGDSAPLAALHEAAKRQNAWLLVDDAHGIGVMGDEGRGSAHQQNVKPELLIVTFGKGFGV SGAAVLCSDSVADYLLQFARHLIYSTSMPPAQAVALSASLAVIRSAEGDERRQRLAEHIS RFRQGLAALPFHSPDSQSAIQPVIVGENGRALALAQALRERGMWVTAIRPPTVPPGTARL RLTLTAAHEARDIQTLLEVLHDAGE