Protein Info for EX28DRAFT_2145 in Enterobacter asburiae PDN3

Annotation: Sugar phosphate permease

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 433 transmembrane" amino acids 21 to 39 (19 residues), see Phobius details amino acids 61 to 83 (23 residues), see Phobius details amino acids 90 to 110 (21 residues), see Phobius details amino acids 113 to 132 (20 residues), see Phobius details amino acids 149 to 171 (23 residues), see Phobius details amino acids 177 to 199 (23 residues), see Phobius details amino acids 242 to 266 (25 residues), see Phobius details amino acids 279 to 300 (22 residues), see Phobius details amino acids 312 to 334 (23 residues), see Phobius details amino acids 340 to 364 (25 residues), see Phobius details amino acids 376 to 397 (22 residues), see Phobius details amino acids 405 to 426 (22 residues), see Phobius details PF00083: Sugar_tr" amino acids 17 to 197 (181 residues), 34.9 bits, see alignment E=8.4e-13 PF07690: MFS_1" amino acids 30 to 377 (348 residues), 192.4 bits, see alignment E=1.1e-60

Best Hits

KEGG orthology group: K08191, MFS transporter, ACS family, hexuronate transporter (inferred from 99% identity to cko:CKO_02296)

Predicted SEED Role

"Hexuronate transporter" in subsystem Alginate metabolism or D-Galacturonate and D-Glucuronate Utilization

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (433 amino acids)

>EX28DRAFT_2145 Sugar phosphate permease (Enterobacter asburiae PDN3)
MSQDINNTVATSKTRRVIKNLRWYVLVLFLLGVTVNYITRNSLGILAPELKESLGITTEQ
YSWIVGAFQIAYTIFQPLCGWLIDVIGLKIGFMVCAGIWALMCIFHAGAGSWLHLAILRF
FMGASEAAATPANAKTIGEWFPKSERPVAAGWAGVGFSIGAMLAPPIIYFAHASFGWQGA
FMFTGVLALLWVILWWAFYHNPEQHPNLSKDELAFIKQDNEPPAVRLPFLTALKTVSKNK
RFYGIAIPAFMAEPAWAVLSFWVPLYLAKEHGMDLKQIAMFAWLPFLAADLGSVASGYLT
RLYTRLFGCSRVNSVVASSVTGAFLMISLGIVAITRDPYITIVLISIGGFGHQIISCMLS
ALVVESFDKGQMATVNGMRGSAAWIASFLFSLLIGVTADKIGFNPLFIAMGFFDLIGAVF
LVAFIAERRAKRA