Protein Info for EX28DRAFT_1737 in Enterobacter asburiae PDN3
Annotation: Uncharacterized protein conserved in bacteria
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 79% identical to CHBG_ENT38: Chitooligosaccharide deacetylase (chbG) from Enterobacter sp. (strain 638)
KEGG orthology group: K03478, hypothetical protein (inferred from 88% identity to enc:ECL_02434)MetaCyc: 71% identical to chitooligosaccharide monodeacetylase ChbG (Escherichia coli K-12 substr. MG1655)
3.5.1.-
Predicted SEED Role
"Cellobiose phosphotransferase system YdjC-like protein" in subsystem Beta-Glucoside Metabolism
MetaCyc Pathways
- chitobiose degradation (2/2 steps found)
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
Find the best match in UniProt
Protein Sequence (249 amino acids)
>EX28DRAFT_1737 Uncharacterized protein conserved in bacteria (Enterobacter asburiae PDN3) MENLLIVNADDFGLSKGQNYGIIEACRRGVVTSTTALVNGEAVEHAAQLSREVPELGVGM HFVLTLGMPLSPMPGLTRDGQLGKWIWELAEQDALPLEEIAGELERQFNRFIDAFGKAPT HIDSHHHVHMIPAIFPIVAEFAQRKGVAMRVDRGASSVPDCAVTTTEGFSSAFYGDKIDE ALFLKVLDGSAARGEKSLEVMAHPAFVDNTVRKSAYCWPRLAELDVLTSASLKYAIAERG YRLGTFRDL