Protein Info for EX28DRAFT_1702 in Enterobacter asburiae PDN3
Annotation: Beta-glucosidase-related glycosidases
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
KEGG orthology group: K05349, beta-glucosidase [EC: 3.2.1.21] (inferred from 95% identity to enc:ECL_02390)Predicted SEED Role
"Beta-xylosidase (EC 3.2.1.37)" in subsystem Xylose utilization (EC 3.2.1.37)
MetaCyc Pathways
- cellulose degradation II (fungi) (2/3 steps found)
- neolinustatin bioactivation (2/3 steps found)
- (1,4)-β-D-xylan degradation (1/2 steps found)
- linamarin degradation (1/2 steps found)
- lotaustralin degradation (1/2 steps found)
- linustatin bioactivation (2/4 steps found)
- coumarin biosynthesis (via 2-coumarate) (2/5 steps found)
- α-tomatine degradation (1/6 steps found)
- firefly bioluminescence (2/14 steps found)
KEGG Metabolic Maps
- Cyanoamino acid metabolism
- Nucleotide sugars metabolism
- Phenylpropanoid biosynthesis
- Starch and sucrose metabolism
Isozymes
Compare fitness of predicted isozymes for: 3.2.1.21, 3.2.1.37
Use Curated BLAST to search for 3.2.1.21 or 3.2.1.37
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
Find the best match in UniProt
Protein Sequence (791 amino acids)
>EX28DRAFT_1702 Beta-glucosidase-related glycosidases (Enterobacter asburiae PDN3) MTTIYKDAGRPVHERVADLLARMTPEEKFAQMHAYWLILDENGNHRERSDLSDEFAGVSE QAALSERLKLGVGQITRPLGTHIVDAKTGVRAANRLQRMMMEETRLGIPALFHEECLVGL LCKDATLFPSSLNYGSTWDPELVQRAAEQIGKEARSVGCQQGLAPVLDVSRDVRWGRTEE TFGEDPWLVGVMATAYVKGLQGDKRDLLATLKHYVGHSFSEGARNHAPVHLGFSELNDTF LLPFEMAVKLANAGSVMPAYHDIDNQPGHSDSFLLTTVLREQWGFDGIIVADYGGVSLLH QHHGISHDAAESAALAFNAGLDVELPKDDCARHLAEAVERGLISMAKVDEIVARTLTEKF RLGLFENPYADENGIDLQNDMTRQAAREVATKSLTLLENNGILPLGGKPRVAVVGPTADD PLALLSGYSFPVHLIISDMVEETSQVTTPRAALEQYLGASNVRYAKGCHIIEKRMAGAPV FPGDSGGKPMQQSPVSLSTALIPEAVNAARESDVVVACVGDLAGLFQSGTVGEGSDTDSL NLPGVQQQLLEALVATGKPVIVVMTGGRPYNLQGLEDKVAALMMAWAPGQEGGWAIADVL TGRAEPQGRLVVSVPKSAGAMPYYYNHKLKSGGTPFAFHFGSRYPFGFGLGWTTFSWGAV RVAESSVPVDGEVTLSVDITNTGERSGSEVVQVYVRDKVATQVRPLQELKAFQRVTLSPG ETATLAFTLPVEMFNFTRRDGKRIVEPGEFELQVGASSADIRGAVTVNATGETRVLPAEW RMLSTCEVRRA