Protein Info for EX28DRAFT_1589 in Enterobacter asburiae PDN3

Annotation: Cellobiose phosphorylase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 200 400 600 800 1000 1200 1400 1600 1800 2000 2200 2400 2600 2860 transmembrane" amino acids 416 to 436 (21 residues), see Phobius details amino acids 442 to 463 (22 residues), see Phobius details amino acids 823 to 841 (19 residues), see Phobius details amino acids 847 to 868 (22 residues), see Phobius details amino acids 897 to 918 (22 residues), see Phobius details amino acids 950 to 967 (18 residues), see Phobius details amino acids 972 to 992 (21 residues), see Phobius details PF10091: Glycoamylase" amino acids 1325 to 1512 (188 residues), 54.1 bits, see alignment 2.4e-18 PF06165: Glyco_transf_36" amino acids 1582 to 1833 (252 residues), 248.9 bits, see alignment E=8.4e-78 amino acids 2091 to 2332 (242 residues), 269.6 bits, see alignment E=4.1e-84 PF17167: Glyco_hydro_36" amino acids 2363 to 2787 (425 residues), 399.4 bits, see alignment E=2.5e-123

Best Hits

Predicted SEED Role

"Cyclic beta-1,2-glucan synthase (EC 2.4.1.-)" (EC 2.4.1.-)

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 2.4.1.-

Use Curated BLAST to search for 2.4.1.-

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (2860 amino acids)

>EX28DRAFT_1589 Cellobiose phosphorylase (Enterobacter asburiae PDN3)
MKMKHIAWFKRSRILPEGSAHISATVNDWGGENYLRSELFSTPQLERFGKKLARTHKLSP
EILPYYLLKRLTDNETIITRCCYLLNAGKKTSIMPAGEWLLDNYYLIEEQIRMVRQHLPK
SFGKGLPLLAYPHRCPRIYDLASEAIAHGDGRWDTSSLTSYISAYQEVTPLTLGEIWALP
GMLRLALIENLRRVSNEVTQAQQERNLADMWITRIFDCAENAPADLIMIVADMARTHPPL
SSAFVAEMVRRLQGHGNALALPLNWIEQRLAEQGVTTEVLIHRFNQQLAASQLSVSNSIS
GLRLLNETNWSDFAETISVVEQTLRLDPAGIYPHMHFDTRDHYRHVIETLARDAILSEPE
VANRVMAMSCEPSLDPEHRHIGYFLLGGGRPQLEKLLSAERSLLKRLRQSMNKSPLLSWL
GSLSLLTTAATATILYETALQGIFWLLIPLALPLIVAISQLASDMLSEATTRFRIPRPLP
RMDFSSGIPVEYATMVAIPCMLTSYESLSKLLSRLEVCSLGNQDENLCFALLTDFPDSST
EDTEENTVLLRQAIAETQRLNRRNPSGRSRFYLLHRQPVWNDSQRIWMGYERKRGKLALL
NSWLRQPGIQFSSVAGFPSQALPGRIKYVITLDSDTLLPRDTAHKLVATMAHPLNKPEYD
PTFQRVVKGYGILQPGLAEEMPLYGQGHYAAMRSSIPGNNPYSMMSSDIYQDLFGEGSFV
GKGIYDVDIFVQSTANVCPENLVLSHDLLEGCYARSGLLSDVLLYEQYPTNYISDVARRT
RWIRGDWQLLNWLRVRVRKADGSREKNPLSILSRWKLLDNLRRSLVAPSIMLLVLSTLLW
LPNPLYWFSVLTLIWFLPAALSIAWDLVHKPHRRPLKQHLQLVSAGALKRISRIGLTIMI
LPHEAGYSLYAIGVTLWRLGVSQRNLNQWVSYNPDNYQSSVSVLGFYREMWLNVACGLSL
TSLALVFDPLMLFIALPISVGWCIAPIIMAWLSRQPARKPFLPDHKQKLLLRQTSREIWS
FFETFATAKENWLPPDNYQEIPQPTIAHRTSPTNIGLSLLANLTAWDFGYLPGGSVLQRI
TLTLDSLDNMEHFRGHLYNWYDTRTLAPLSPRYVSSVDSGNMAGHLLTLREGLLAMRNQP
ILNGERILAGLNDTLLLLEKHWGPGAPDTLKELQKQCFSSVELPSGALYSELKKMRTQCK
YLTAASQQEGDLVVRWAEHLEHQLVELCHEWSHLLAWLPPTYPSETLPTLSWLAQSTDTG
EGTPPASVITHARLRLDIISELEKRLNDHARMDFAFLYSEATSLLSVGYNCDTNTADKSH
YDLLPSEIRLTSYLAIATNQLPMKSWYALGRLFTNIDNETSLMSWSGSMFEYLMPNLVMP
NWRGSLLDEMGKSAVTRQINWGKERGVPWGVSESGYHAFDVQRNYQYQAFGVPGLGLRRG
LADDMVVAPYATLLALLVYPQKACENLLRLEQSGAHGEYGFYEALDYTPSRLATGQLYAV
VQSWMAHHQGMGFQALAHILLDAPMIERFMASPTFMSANLLLQERVPDAVDLYSPRRHFE
SHEGRVKPVRYEPRVFSHVDSPTPEIQLLSNGHYHLMLTPGGGGYSRWNSISVTRWRSDT
TRDNWGSFCYIRDPHTNEVWSNTWQPMGGNANNSDEIIFTDAGAEFRRTFGALSVRTQVV
VSPEDDIELRRVTLVHHGRLPRTLELTTYAEVVIAPETSDLAHPAFSNLFIETEIDHSRE
AILCHRRPRSPDETSPFLFHMMVVHSNDHNEASFETDRAKFIGRGRSPADAAAIYANGPL
SNTSGAVLDPVLAIRQVVRLMPGIPITIDIVYGISESRQQSKALLEKYRDYPIAERVFEL
AWSHSLVVLRQINASEDDATLFNRLASAVLYPCHELRADDQVISRNRRGQSGLWGWGISG
DLPIVLHSVTSDESMTSITTLIQAHRYWRLKGLEVDLVILNNSAGGYQQALQTLIMDLIY
AGSEASLLDKPGGIFVRNGEHLSSEDKQLLMSVACMYLDDRAGGLNEQLNQRLHSPIKPQ
RPFVSFVTEGSNRQEDWTPHIEHLFNFNGHGGFSEDGREYQIILKENVPTPAPWSNVLAN
SCFGSVISEAGQAYSWYENAHEYRLTPWENDPVSDRSGEAFYIRDEESGTVWSPTTLPVR
GRGDYLTRHGFGYSVFAHRDSGIDSELTILVGEHDPVKLALLTLSNNSGRTRKLSVTGYV
EWTLGESRSRSAPHIVTHTVVVPGGSGVTANNFYGANGEGRIAFFAVNDPNCSLTGDRRE
FIGRNGSLQKPAAMKLRSLSGNTGAGLDPCGAVQSVTTLIDGDQKTFIFVLGSEENSARA
QTILDHYLDENVVRQELDNVHRHWHRMLDKIVVKTPDHSVDKLVNGWLLYQTMACRLMAR
SGYYQSGGAFGFRDQLQDTLALTHAAPERLRDQIVLCASRQFIEGDVQHWWHPPHGSGVR
TRCSDDFLWLPLAVCHYVDTSGDIGILEQMIPYLEGRQLQPGEESVYDTPLISHTEETLW
QHCVKAIKHGLRFGQHGLPLMGAGDWNDGMNRVGIEGKGESVWLGFFLFDILKRFATHAE
RQQDKLVASLCRTEAEHLQKNLNATAWDGEWFRRGYFDDGTPLGSKSSQDCRIDAIAQSW
SVLSGATDCGRAGKSMQALDKHLVNSESRLIKLLSPPFDGHGPNPGYIQGYVPGVRENGG
QYTHGAIWAVMAFARMGNAERAWQLWSLINPINHASTDEEVAIYRAEPYVMSADVYSIAP
HTGRAGWSWYTGSAGWAYRLLTEELMGIKRSGDVLTIHALLPAEWESFSLTYQHDESYYE
ITITRGNGEYQVILDGIELSDDRIPLKQDGQRHIVEITQN