Protein Info for EX28DRAFT_1560 in Enterobacter asburiae PDN3

Annotation: Predicted metal-dependent protease of the PAD1/JAB1 superfamily

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 240 PF14464: Prok-JAB" amino acids 3 to 101 (99 residues), 71.8 bits, see alignment E=4.6e-24 PF00877: NLPC_P60" amino acids 116 to 231 (116 residues), 68.1 bits, see alignment E=6.1e-23

Best Hits

Swiss-Prot: 85% identical to TIPK_BPN15: Tail tip assembly protein K (gene) from Escherichia phage N15

KEGG orthology group: None (inferred from 83% identity to enc:ECL_01713)

Predicted SEED Role

"Phage tail assembly protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (240 amino acids)

>EX28DRAFT_1560 Predicted metal-dependent protease of the PAD1/JAB1 superfamily (Enterobacter asburiae PDN3)
MRQKTIQDILAHAAKDYPHECCGVIAQKSRVERYFPCRNLAAEPTEQFHLSPEDYAAAED
WGTITGIVHSHPDATTQPSELDKAQCDATLLPWHIVSWPEGDFRTITPRGELPLLGRPFV
LGHYDCWGLVMSYFRQEHDVELQDYRVDYPWWEDSYPDNFYQDCWYECGFREFSGSPMPG
DLIIMQMESNKWNHSGILLEGNMLLHHLYGHLSQRVPYGGYWMERTMKIVRHKSLIMQEG