Protein Info for EX28DRAFT_1419 in Enterobacter asburiae PDN3
Annotation: phenylacetate-CoA oxygenase, PaaH subunit
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 97% identical to PAAB_ECOLI: 1,2-phenylacetyl-CoA epoxidase, subunit B (paaB) from Escherichia coli (strain K12)
KEGG orthology group: K02610, phenylacetic acid degradation protein (inferred from 97% identity to eco:b1389)MetaCyc: 97% identical to phenylacetyl-CoA 1,2-epoxidase subunit B (Escherichia coli K-12 substr. MG1655)
RXN0-2042 [EC: 1.14.13.149]
Predicted SEED Role
"Phenylacetate-CoA oxygenase, PaaH subunit"
MetaCyc Pathways
- superpathway of phenylethylamine degradation (11/11 steps found)
- phenylacetate degradation I (aerobic) (9/9 steps found)
Isozymes
No predicted isozymesUse Curated BLAST to search for 1.14.13.149
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
Find the best match in UniProt
Protein Sequence (95 amino acids)
>EX28DRAFT_1419 phenylacetate-CoA oxygenase, PaaH subunit (Enterobacter asburiae PDN3) MSNVYWPLYEVFVRSKQGLSHRHVGSLHAADDRMALENARDAYTRRSEGCSIWVVKASEI VASQPEESGEFFDPAESKVYRHPTFYTIPDGIEHM