Protein Info for EX28DRAFT_1353 in Enterobacter asburiae PDN3

Annotation: Major Facilitator Superfamily

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 transmembrane" amino acids 37 to 57 (21 residues), see Phobius details amino acids 75 to 93 (19 residues), see Phobius details amino acids 104 to 123 (20 residues), see Phobius details amino acids 130 to 151 (22 residues), see Phobius details amino acids 163 to 182 (20 residues), see Phobius details amino acids 194 to 215 (22 residues), see Phobius details amino acids 228 to 247 (20 residues), see Phobius details amino acids 258 to 277 (20 residues), see Phobius details amino acids 289 to 310 (22 residues), see Phobius details amino acids 332 to 350 (19 residues), see Phobius details amino acids 357 to 374 (18 residues), see Phobius details amino acids 392 to 414 (23 residues), see Phobius details amino acids 422 to 445 (24 residues), see Phobius details amino acids 513 to 533 (21 residues), see Phobius details PF07690: MFS_1" amino acids 48 to 351 (304 residues), 36.6 bits, see alignment E=1.3e-13

Best Hits

KEGG orthology group: None (inferred from 98% identity to enc:ECL_02086)

Predicted SEED Role

"Permeases of the major facilitator superfamily"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (550 amino acids)

>EX28DRAFT_1353 Major Facilitator Superfamily (Enterobacter asburiae PDN3)
MRLPERDPYAPREWQPHEKPALLGSPSTPEHTTPKRIAYGVVGLLVCLTGALGNAVVTAN
LQNLQGTFGAWSTEIAWLPAVYVMTNISINLLLVKFRQQYGLRAFTEGFLVLYVLVTFFH
LFVNDLSSALMVRAAHGMVAAALSSLGIYYQIQAWPAKHRLKALTIGITGSSLAIPLARL
FSTELLQLDEWRGLYFFELGLALISLACVIALKLPPGDRRKVFEKKDFITFFLMAPGMAL
LCAVLSLGRLDWWFEAPWIGWSLALSLVLIVAAIVFEHNRANPLLNTRWLSSGSIVRLGL
IMLLIRIVLAEQNTGVIGWLQYVGLQNEQMTHLAWSIFAGIVCGIVTSCLTIKPTKLAWP
IITSLALMIVASLLDSQSNNLTRPDQLMLSQFLLGFGSAFFLAPAMLAAIGGVIADPRNL
VSFSVMFGMSQNLGGLLGSAILGTFQTWREKYHSSLLADQLTTLNPLVNERIQIYTQMYR
SLIGDSSLLGTQAITQLQTVTTLEANILAYNDTYLLTASIAAATLVWILWRLLRLRITAR
MALKNATGNK