Protein Info for EX28DRAFT_1345 in Enterobacter asburiae PDN3

Annotation: Bacterial Ig-like domain (group 3)/Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella/Putative flagellar system-associated repeat

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 500 1000 1500 2000 2500 3000 3500 4000 4500 5000 5500 6001 PF19077: Big_13" amino acids 181 to 270 (90 residues), 36.9 bits, see alignment (E = 1.6e-12) amino acids 306 to 371 (66 residues), 32.4 bits, see alignment (E = 4e-11) amino acids 383 to 470 (88 residues), 44.9 bits, see alignment (E = 4.9e-15) amino acids 504 to 563 (60 residues), 27.4 bits, see alignment (E = 1.4e-09) amino acids 980 to 1061 (82 residues), 34.6 bits, see alignment (E = 8.1e-12) amino acids 1102 to 1168 (67 residues), 28.8 bits, see alignment (E = 5.2e-10) amino acids 1195 to 1266 (72 residues), 31.8 bits, see alignment (E = 5.9e-11) amino acids 1590 to 1666 (77 residues), 34.3 bits, see alignment (E = 9.8e-12) amino acids 1794 to 1864 (71 residues), 32 bits, see alignment (E = 5.3e-11) amino acids 2192 to 2264 (73 residues), 37.5 bits, see alignment (E = 9.8e-13) amino acids 2298 to 2360 (63 residues), 30.8 bits, see alignment (E = 1.2e-10) amino acids 2787 to 2862 (76 residues), 32.7 bits, see alignment (E = 3.1e-11) amino acids 2897 to 2963 (67 residues), 32 bits, see alignment (E = 5.3e-11) amino acids 3386 to 3461 (76 residues), 36 bits, see alignment (E = 3e-12) amino acids 3496 to 3562 (67 residues), 32.1 bits, see alignment (E = 4.7e-11) amino acids 4100 to 4161 (62 residues), 29 bits, see alignment (E = 4.6e-10) amino acids 4196 to 4262 (67 residues), 31.9 bits, see alignment (E = 5.7e-11) amino acids 4288 to 4361 (74 residues), 36.4 bits, see alignment (E = 2.3e-12) amino acids 4386 to 4457 (72 residues), 34.2 bits, see alignment (E = 1e-11) amino acids 4571 to 4663 (93 residues), 47.9 bits, see alignment (E = 6e-16) amino acids 4677 to 4769 (93 residues), 41.8 bits, see alignment (E = 4.5e-14) amino acids 4782 to 4875 (94 residues), 42.4 bits, see alignment (E = 3e-14) amino acids 4890 to 4981 (92 residues), 48.2 bits, see alignment (E = 4.8e-16) amino acids 4994 to 5085 (92 residues), 55.3 bits, see alignment (E = 2.8e-18) amino acids 5112 to 5192 (81 residues), 41.8 bits, see alignment (E = 4.6e-14) PF17936: Big_6" amino acids 198 to 263 (66 residues), 36.2 bits, see alignment (E = 2.1e-12) PF12245: Big_3_2" amino acids 4635 to 4663 (29 residues), 13.7 bits, see alignment (E = 2.1e-05) amino acids 4740 to 4768 (29 residues), 11.6 bits, see alignment (E = 9e-05) amino acids 5053 to 5084 (32 residues), 14.3 bits, see alignment (E = 1.3e-05) PF13517: FG-GAP_3" amino acids 5466 to 5535 (70 residues), 34.3 bits, see alignment (E = 1e-11) amino acids 5525 to 5588 (64 residues), 38.1 bits, see alignment (E = 6.6e-13) amino acids 5578 to 5641 (64 residues), 29.9 bits, see alignment (E = 2.4e-10) TIGR03661: type I secretion C-terminal target domain (VC_A0849 subclass)" amino acids 5896 to 5998 (103 residues), 30.6 bits, see alignment (E = 3.1e-11)

Best Hits

Predicted SEED Role

"FIG00642489: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (6001 amino acids)

>EX28DRAFT_1345 Bacterial Ig-like domain (group 3)/Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella/Putative flagellar system-associated repeat (Enterobacter asburiae PDN3)
MSNIKVVDVIIRKTAEKTKLTGEGNLSVSISSPSVIEIQGSAQDVARYVRQGKDLLIYMK
DGSVIRCNNYFVEDPETHNQSELVFNDRQELTHISFADAGEASGVAVTELTAQATPISSI
QPFLEQESVLSDAPWGWIAGAALGGGAIGALLANGGDGETKTKVIDNTKEVESATPTFLL
SDKAGDKQGVLSANEITDDSNPTFSGTGQPGATIQIKDSSGSTIASTMVGTDGTWTVILP
TQTDGEHTWSVVQIDGSKTTSAGSITVTVSTADAAITLATTAGDNVLNASEQSAGFTLSG
ASKNLAQGTELTVTLNGKTYAAEVGADGAWSLNVPAADAQALGDGTWTVSVSGKDAAGNT
VSGSQTIGVDTTAPTLSVDTLAQDNIINAAEHNQPLTLTGKTNAEAGQIVTVTLNGKNYN
ATVGSDGTWSVTLAASDVQALNEGNHTLTVNVSDKAGNGSSVTADFTVDTAAPVVTIHTV
AGDDILNISEQGQAHIISGQASGAAAGDVVTVTLGGQTFTGVVLADGSWSVGVPASVLGA
LGEGNHTLSVSVTDAAGNTGSATHGITLSGHPPEFTIDAISQDNVLNAQEAMQPLSLTGT
SNLPDGTTVTVMLNNVSYQATVENGIWAVQVPVSDVLNLANTLYTVSVSGTDGVGNSGSA
EANLLVDTVLPQVIINTFAGDNLVNNAEAGVDQTLSGRVTGAAAGDTVSITAGGKSYTAT
VGNDLTWSVKIPSADLQAFGDGDLTFTASVTNAHGNTGTGERDININAELPGLRVNTISG
DDVINAIEQQQDLSVTGSSSHLAAGTQIIVTINNVEYVTAVNASGSWQIGVPAADLQAWT
AGGMTVSVSAVDAWGNPVAAEHPIELDLNAVAVTIDTVSGDDLLNAAEKGGDLTLSGQTQ
GVEAGQTVVVKFADQTFTAQVQQDGSWSLTVPASAMETLIDGRAQVSVSVTNVSGNSADA
ARVVTVDTQPPAITLDNLTADNIINAAEAQQDLALSGTSTAEAGQTVTVTLNGKTYQTTV
QADGTWQLSVPAADVGALTDGIVTVTASVSDVAGNASSADRVGLVDATVPQVTINDFVTD
TNTVNQLAHSQAQILSGSVTGAAAGDLVTITINSVDYTTVVDAAGNWSLGLPASVVQGLT
DGTWTIDVSVTDRSGNTGSSSLDVVVNTVTPVIGINTLAADDVINATEKGEDLLLSGTSN
QPEGTTITVTLNGIQYTATADASGNWSVTVPASAVSALGEAHYTVTASVTDSVGNSASTS
HDVLVDSSLPVVTINTLAGDNIVNAAEVAAGQTLTGKVTNAAAGDTVTIILGGQTYTATV
QGDLTWSLPLSESQLTALGNGDLTVSASVTNAHGNTGSSSLDFSIDAQLPGLRIDTVAGD
DVINVIEHAQNLIVSGTSTDLTAGSTVTLTINGKTYSATVLADGTWQAAVPAADVSQWAD
GSLDIKASAQDASGNPVTIGTVVDVDLAPVAITISSVTDDNVLNAAEKGQDLVLSGTTSN
VEAGQTVTITFAGKTYTTTVDANGDWTWTVPAADLSGLKDGDASVQVTVTNVNGNAASSA
QEFSVDTTAPTVTINTISSDNMLNAAEAAQDLTLSGTSTAEAGQTVTVTFNGNQYTAQVQ
ADGSWTLDVPAADMAGIADGSAAVTATVSDKAGNPASAGYSVLVDTTVPQISFNIVAGDD
VVNIAEHGQALIVSGKVTGAQAGDVITVTLNGKDYTAMLDASGSWSVGVPAADVGALVNG
EQTISATLTDKAGNSTSATHAFDVSLTAPVIAINTLAADDVINATEKGQDLLVSGTSNQP
DGTTITVTLNGISYTATTDASGSWSITVPAANVSALGEASYVVTASVTDAAGNSASTGHS
VLVDSALPQVTINPVATDDVINAAEVAAGQTLSGKVSGAVSGDTVTISIGGNTYTATVQD
DLSWSVNVPSTVLTAIGNGDLTVSASVTNGHGNTGTGERDITIDANLPGLRVDTVAGDDV
INSIEHAQNLIITGSSEGLATGAALTVTVNGKTYAATVLADGTWTAAIPAADVSALNAGT
IVVTVEGQSAAGNPVSISHDVKVDLAAVAISINPIASDDVINAAEKGADLVLSGSTTNVE
ENQTVTITFGGKSYTATVDASGNWTATVPSADLGSLKDGDASVQVSVTNVNGNSASAGRE
YSVDATAPTVSIEIVSDNNIINAAEAQQDLVVNGVTNAEAGQTVTVTLNGVDYTTTVQAN
GNWSVTVPSADLSGITDGNYTISAAVSDKAGNPASADLDVLVDTTVPQLTINTVSDDDVI
NSAEHAQALIVTGSVTGAAAGDVVTVTLNGKSYTATLDASGNWSVGVPAADVTALAAGDY
TITAALTDKAGNSNSATHGVEVNLTAPVLTIDTVSGDDAINNAEKTQDLTISGTASGLAA
GAVVTVMLNGKAYSAQVDDNGKWTTTVPANEVGQLGEALYTVTASAMDSVGNNTSTSHTV
NVESVLPGMIVNTIAGDDVINAAELAAGQTISGKVVNAEAGNTVTVTIGGNSYTATVQSD
LTWSVNVPESVLTALGNGDLTVSASVTNGVGNSGTGERDIVIDANLPGLRVDTVAGDDVI
NSIEHVQNLIITGSSDGLAAGAALTVTVNGKTYPATVLADGTWSAAIPAADVGALAAGTV
TVTVAGQSSAGNPVSISHDVTVDLANVAISIDAVATDDVINAAEKGADLVLSGATSNVEE
NQTVTITFGGKSYTATVDADGKWTATVPAADLAGLKDGDASVQVSVTNVNGNSASAGREY
SVDATAPSVTINTLANDDILNAAEAQSDLTVSGTTTAEAGQTVTVSLNGKDYTTTVSADG
SWTLNVPAADLAGFTDGSVTVTASVSDKAGNPASVDHNLAVDITAPAVTINTVAGDDVIN
IAEHGQAQIISGTATGAAAGDKVTVTIGGQTYTTVLDAAGNWSVGVPANVISGLSDGTVT
VTASVTDAAGNTGTGTHNVTVDTGLPSVSFNAISDDNVLNAVEKGQDLSVSGTSANLAEG
TLVTVTLNGKNYTATTAADGTWSLTVPAADLAGLGQANYTLNATATNGVGNSVSNTANLL
VDTALPTVTINTVAGDNVINAAEVAAGQTLSGTVANAEAGNTVTVTLGGNSYTATVQNDL
TWSVNVPSDVLTALGNGSLSVTATVTNGHGNTGTGERDIAIDANLPGLRVDTVAGDDVIN
TIEHAQNLIVTGSSDGLAAGTALNVTVNGKTYAATVLADGTWSAAIPSTDVSAWPEGTVK
ISVTGDSSAGNPITISHDVTVDLATVAISIDAIATDDVINAAEKGADLVLSGATTNVEAG
QTVTISLNGKIYSATVDDSGNWTYTVPSADLAHLKDGDASVQVSVTNVNGNSASAGREYS
VDATAPSVTINTLATDDILNAAEAQSDLTVSGTTTAEAGQTVTVTLNGKDYTTTAGADGS
WTLNVPAADLAALGDGSVTVTASVSDKAGNPASVDHTLTVDVTVPAVTINTVAGDDVINI
AEHAQAHIISGTATGAAAGDKVTVTIGGQTYTTVLDAAGNWSVGVPASVISGLSDGTVTV
TASVTDAAGNTGTGTHNVTVDTGLPSVAFNAISGDNVLNAVEKGQDLSVSGTSANLAEST
VVTVTLNGKNYAATTAADGTWSLTVPAADLAGLGEANYTLNAAATNGVGNSVSNTATLLV
DTALPTVTINTVAGDNIINAAEVAAGQTISGKVANAEAGNTVTVTLGGNNYTATVQSDLT
WSVNVPESVLTALGNGDLTVSATVTNGHGNTGAGEREIVIDASLPGLRIDTVAGDDVINS
IEHGQNLIVTGSSDGLAAGTTLTVTVNGKTYAASVLADGTWSAAIPAADVGALAAGTVTV
TAAGQSAAGNPVSISHDVTVDLSAVAISIDAIATDDVINAAEKGADLVLSGSTSNVEENQ
TVTITFGGKTYTAKVDADGNWTATVPSADLAGLKDGDASVQVSVTNAHGNSASAGREYSV
DATAPAVNIDTVAGDNVINASEAAAGVAISGTTTAEVGQTVTVTLGGKSYTAQVQQGGIW
SVNVPGADLSALADNGYTVEVSVSDAAGNPGSAGKAITLDTTPPTVSFNAVAGDDVINSV
EHGQAQIVSGTATGASVGDKLVITIGSNQYTTTVDASGNWSVGVPASVISALNDGTVTLS
ATITDSAGNSSTQTHDVVVNTASVALTINTLSGDDVINAAEAGSSLVINGSSAQFASGTQ
VTVTLNGKSYTATIQSDGSWTTTVPAADVGALADGASYQVSVSAQDSAGNSASATHGISV
DTTAPVVSIATLSTDDMLNALEAQQPLTVHGSSSAEAGQTVTVTLGGKSYTATVANDGTW
TLDVPAADLAALSQGALTVTASVNDKAGNSGQTTHTLTVDTVAPTVTISTVADDDIVNNA
EQLAGQTISGTTTAEQGQTVTVSFNGHSYQATVGADGSWSVFVPGRDFLGLSDGDYTITA
SVNDRAGNPGSATHDVTLNGDVPTITINTFAQDDIVNAAEHGTPLTVSGTTDAPAGQTVT
ITLNGKTYTATVQNDGTWSYTVGSADVTALADGGSYVINAQVSNTIGNSGSDNHSVTVDL
TAPSMGITIDSLQNDTGLSATDFITNDAQVVVNGSLSAQLGNNEKAQISLDGGSNWIDLT
VTGTTWRYTDGRTLTDGTYQYQVRVIDNAGNVGATDSQDVVIDLTKPVATTITVDSITQD
TGLSGSDFITSDNQISLKGTLGAALGSGDHAQISLDGGVTWIDVSVSGLSWTYVDGRTLA
DGDYNYQLRVIDDAGNISATASQVVTIDTVAPDASKTIAIDSISDDTGLSGSDFVTNDTS
LTLHGSLGATLADGEYAQISIDGGVTWQNVIVTGNSWYYVDSRTLGNQTYDYYVRVVDAA
GNVGASAHQQVTVDTVAPDAAITVTVDNITVDTGFDNNDFLTSSTSYTLHGTLGAELGAG
EFVQVSMDGGSTWVYATVSGTQWSYSDTRTLTDGSHNYQVRVVDQAGNVGATTAQAVTVD
TQAPQYGVTIDSISKDTGQSGSDFITMDTTLTINGSLGSALANDERVQISLDGGNTWLDT
TVTNQRWSYTDTRDLPDGDYTYQVRIIDQAGNVGSTASQVVTVDTTPPTTVGTVVSYTDG
EGERQGTFGSAVATDDNSPLINGTLNRAPDDGEIVQLYRDGVLLGQVTMNGSASWSFQDN
GLSDGNHTYIVRVTDRAGNYTESDGFVLNVDTSIPTTTAAITAQTTSDTTPIVSGTVSAD
LVNGEYLVVTVNGKTYTSQTGGAVVVDPDHNTWYLQIPDGDALSVSSYSVTAQVKSSAGN
GNTTGTATGSLVIDTTSVNTDWATTAGNSNNSTMTLGMNSSGLWNIIANGQSYSSSDSST
YAGNTLTNTRSYYVVSQTAADFDRNGTQDIFATETTYSGSTQVMWTYDGSTYNASQLAMG
TTIWYGGVIAYDKTGDGYLDLAYGDAGMDSLTYLVNNNGVLSPDGTGGEGGFYGQFDSGR
EISGVDLNNDGTVDIVQHTNRSGAYSLTVINNNGNGTLSIGQNLTNVFVANASNTTTAAS
MTWADFNGDGYMDLYLGSSYNNNGGVIYYNNGAGQLSATKSAVEASNATAGYLSVAVDWN
GDGQMDIIKLSSYGGSQTATLFTNNGYGSTWTSSQLASGLANVTGVAAVDYNWDGAQDLL
VSQQNGKVVLVQNSKTIADGTAMHLHIVDSEGINAYYGNTVNLYNAAGVLVASQIINAQS
GIGSNDTSALVSFYGLDPNETYSAEILKITNGVSDNVTWSGLEAGNGKEGYVLTAEAATG
GHSGTITGTGYNDTFIAEDGTYTYNGSGGWNTHSDYDTWSNTGGMDVVDYRNATSGVTVD
LRLSTAQDTGFGTSRLLNIEGINGSDFDDVITGNSGDNQFEGRGGNDTFNIGSGGHDTLL
YKLINASDATGGNGHDVVNGFTVGTWEGTADTDRIDLRDLLSDSGYTGTGSASYVNGVAT
LDSSAGNISDYIRVVQNGSNTEIQVDLDGTGGQFSPTTLVTLNGVQTDLATLLANHQLLI
A