Protein Info for EX28DRAFT_1137 in Enterobacter asburiae PDN3

Annotation: Beta-galactosidase/beta-glucuronidase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 723 signal peptide" amino acids 1 to 21 (21 residues), see Phobius details PF00703: Glyco_hydro_2" amino acids 192 to 300 (109 residues), 41.4 bits, see alignment E=2.3e-14 PF02836: Glyco_hydro_2_C" amino acids 311 to 439 (129 residues), 23.5 bits, see alignment E=2.8e-09

Best Hits

KEGG orthology group: K01192, beta-mannosidase [EC: 3.2.1.25] (inferred from 75% identity to kpu:KP1_2375)

Predicted SEED Role

"Beta-mannosidase (EC 3.2.1.25)" in subsystem Mannose Metabolism (EC 3.2.1.25)

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 3.2.1.25

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (723 amino acids)

>EX28DRAFT_1137 Beta-galactosidase/beta-glucuronidase (Enterobacter asburiae PDN3)
MTRNCTLLFALFLPTMVATSAPVSWSLAGTWQVQDANDGTHPPASGWRGLKVPANWYSAG
YDHQGALWYKHAFTLPLQPPDVMSTLVFDGVDYLADVTLNGQPLGKHEGYFQRFSLDASA
ALQRHNQLVVRVDSPYEDPHKVWPLHKTLMKGILNQHDTRPGGAWSPEGQDANSGGIWAP
VRLHLSRGATLDEIILRPDWSQGLKSPALKAEIRYRALGKGQATARLTATPANFSGKRFQ
ADFPVTLENGAHSARVTLSMPAAKLWWPVGTGKPQLYTVRVSLRDEKGLMDTAVTRTGLR
KIVEQPGNKGWLINDRRLFVKGSNYIGSPWLGTMTREKYRRDLRLAEAMNANAIRVHGHV
AGRALYDVADEMGMMIWQDVPLQWGYDSSDAFTKNAVRQTREMIEQFGNSPAIIVWGGHN
EPPWNSPWMEKRFPDWNKNLNRELTQRVADTLAEDTSRIVHRFSAVEEHYWAGWYFGSVR
DLLTPAKTGIITEFGAQALPRLSTLKTIIPAAQLWPKTTAADDPSWSVWKYHNFQPFQTF
KFAGIPRGNTIQEMIRNTQAYQSQLVATAAESYRRQRYQPVTALFHFMFVETWPSINWGV
VDYLRKPKAGFYALKRAYQPVLPSIEPVTPQWKSGTAATVRLWAINDTWKRCSECRLSWR
ITQRAKVLAKGTMTMTIPADSGTMVKTLTATPVGQDEVSITFTIENKAGKRVGENQRTES
VIK