Protein Info for EX28DRAFT_0909 in Enterobacter asburiae PDN3

Annotation: Phage-related tail fibre protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 621 PF12571: DUF3751" amino acids 1 to 151 (151 residues), 189.1 bits, see alignment E=4.6e-60 PF03406: Phage_fiber_2" amino acids 170 to 210 (41 residues), 77.5 bits, see alignment 4.5e-26 amino acids 214 to 254 (41 residues), 70.5 bits, see alignment 7.4e-24 amino acids 258 to 296 (39 residues), 66.1 bits, see alignment 1.7e-22

Best Hits

Predicted SEED Role

"Phage tail fibers"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (621 amino acids)

>EX28DRAFT_0909 Phage-related tail fibre protein (Enterobacter asburiae PDN3)
MTVKYKTVITKAGAIKLAAATVPNGKKVNFTAMAIGDGGGTLPVPDASQTKLVNEVWRHT
LNKISQDNKNKNYVIAELLIPPETGGFWMREMGLYDDTGTLIAVGNMAESYKPELAEGSG
RAQTVRMVIMVSDIESVELTIDTSTVMATQDYVDDKLAEHEKSRRHPDATLTEKGFTQLS
SATDSTSETLAATPKAVKTAYDLANGKYTAQDATTAQKGIVQLSSATDSASETLAATPKA
VKTAYDLANGKYTAQDATTAQKGIVQLSSATDSTSETLAATSKAVKAANDNANGRVPSTR
RVNGRELSQDISITAQDIFNGQAVEIGNAVDLNSITTAGLYYQTSNAQAQTGRNYPESVA
GSLEVYKHAGITQVYRVYADSRSYIRIFYNGTWTPWAKQYDTANKPAPSDIGAVAVNGGN
YNATFGLGRVETIPTESNMSALYNMQAANGGVVSGVEFNWYGHKFSIGITRDNGEGTNGL
VFQHNGYTRLRIDKDGNLISSGAISAGDKVVAGAGVYDTPGVRVYSPNNQPPQQDLSPYA
TTAWVNGNFATQAWTVANFLQGGIRLASLGTADNGNNDNAFAYAPNGAVVTAVQQKTNYT
AVQYRYVQYNIGGNWYTAWVA