Protein Info for EX28DRAFT_0800 in Enterobacter asburiae PDN3

Annotation: FHA domain protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 587 transmembrane" amino acids 417 to 431 (15 residues), see Phobius details PF00498: FHA" amino acids 27 to 93 (67 residues), 37.5 bits, see alignment E=2.7e-13 TIGR03354: type VI secretion system FHA domain protein" amino acids 252 to 574 (323 residues), 143 bits, see alignment E=1.2e-45 PF20232: T6SS_FHA_C" amino acids 393 to 572 (180 residues), 164 bits, see alignment E=3.3e-52

Best Hits

KEGG orthology group: K07169, FHA domain-containing protein (inferred from 93% identity to enc:ECL_01544)

Predicted SEED Role

"Uncharacterized protein ImpI/VasC"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (587 amino acids)

>EX28DRAFT_0800 FHA domain protein (Enterobacter asburiae PDN3)
MRFTIISTKPGHQPPQSSCDFYAPGGTIGRGTDNNLVLPDNDRTISRLQAIVHVDAQGEC
RVTNRGSVTRVVLNDIPLERGRQVELQDGDILGIDDYRIEVTELIHDTQPVSRMAASMHQ
QARPAAASAPAAQPKPASAAPRGKAEPTAVPTEIWDSLMQEFSISDSISSNRTKPQPAAS
HDPFSQPAAPERNAEDPLAMFNDSDPKLERKNVDPDTLFSDEALFKKESIFDDVTPSTLV
PPGETTPAKPEDEATDELDPLALFGGKASAPAARNDDPLGLMGGAPLTHPDDILAEKPAP
VPEPEQEEDVLADSPLFAPEPQEEPRAEEEPARPDYAGFTMPTPQAVARSSAQTPKGRLR
IDPVNNAAAPTATANSGEKGEVLQGELLEALLEGMGLSEMQPVPQFDRENMRQLGQILGM
FSQGTVALLSSRSILKRGVKADMTMVLDDANNPFKLLPTGKTVLIQMFGTPMPGFMPPTK
SVRDALIDLQAHQLGMISGIRAIIAAMLQSFNPEQLEEQAKQNGMTSRLALPGSRKAALW
DYFVRSYGETAGEIEDDFHTLFGEAFLHAYDMEVNQYKDSQSGSEDK